Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC015726.1-201ENST00000602353 681 ntBASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 AC091057.2-201ENST00000602594 792 ntBASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 AL591034.3-201ENST00000605511 685 ntBASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 MIR6867-201ENST00000610636 67 ntBASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 MIR6830-201ENST00000636015 70 ntBASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 CRYM-AS1-204ENST00000637983 556 ntBASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 OR6C71P-202ENST00000641886 1107 ntBASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
MRPL55Q7Z7F7 AC005539.1-201ENST00000443768 1479 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 CR381670.1-201ENST00000624291 1693 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AL121657.1-201ENST00000327215 531 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RPL23AP57-201ENST00000332361 466 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 Y_RNA.234-201ENST00000364409 97 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RNA5SP424-201ENST00000390988 115 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AL031679.1-201ENST00000400616 525 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 MIR887-201ENST00000401258 79 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AL449283.1-202ENST00000418249 604 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 MTCO2P5-201ENST00000422621 426 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AL353678.1-201ENST00000422735 741 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 PPP1R11P2-201ENST00000423543 382 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 TAAR7P-201ENST00000436141 242 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 CYCSP35-201ENST00000451978 304 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RNU7-136P-201ENST00000458819 69 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RN7SL601P-201ENST00000471221 293 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 HSPE1P6-201ENST00000479457 291 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RPL7P38-201ENST00000488396 739 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RPS4XP15-201ENST00000489210 795 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 TXNP6-201ENST00000510190 310 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RAC1P2-201ENST00000511164 579 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RAC1P5-201ENST00000512182 576 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 TTC39CP1-201ENST00000512513 755 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RNA5SP208-201ENST00000516156 78 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RN7SKP21-201ENST00000516503 220 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RN7SKP60-201ENST00000516985 239 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RNA5SP380-201ENST00000517190 98 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC103783.1-201ENST00000520506 373 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC022695.1-201ENST00000522089 237 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC005832.3-201ENST00000537929 631 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC004024.1-201ENST00000549244 247 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AADACP1-206ENST00000561502 1193 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AL132657.2-201ENST00000564417 358 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AMZ2P1-203ENST00000565833 850 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 HMGB1P6-201ENST00000569046 646 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC006116.7-201ENST00000590141 756 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AP001429.1-201ENST00000602568 530 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 U73023.1-201ENST00000603134 700 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 BNIP3P11-201ENST00000603878 563 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC068313.1-201ENST00000604028 1008 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 MIR6130-201ENST00000619419 109 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AC002550.2-201ENST00000621246 394 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AL445264.1-201ENST00000621719 171 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 OR1S1-201ENST00000624470 978 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AL356473.1-201ENST00000406203 1408 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AL022578.1-201ENST00000439330 1433 ntBASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MRPL55Q7Z7F7 AP003122.5-201ENST00000527668 3766 ntBASIC2.38□□□□□ -2.03
MRPL55Q7Z7F7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
MRPL55Q7Z7F7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.38□□□□□ -2.03
MRPL55Q7Z7F7 SPRR2C-201ENST00000290702 219 ntBASIC2.38□□□□□ -2.03
MRPL55Q7Z7F7 RNU6-28P-201ENST00000362378 107 ntBASIC2.38□□□□□ -2.03
MRPL55Q7Z7F7 U8.9-201ENST00000365667 134 ntBASIC2.38□□□□□ -2.03
MRPL55Q7Z7F7 SNORA36C-201ENST00000384289 132 ntBASIC2.38□□□□□ -2.03
MRPL55Q7Z7F7 RNU6-952P-201ENST00000391164 108 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms