Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL355578.1-201ENST00000607405 1328 ntBASIC3.87□□□□□ -1.79
CTR9Q6PD62 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CTR9Q6PD62 MTND5P31-201ENST00000419366 1374 ntBASIC3.87□□□□□ -1.79
CTR9Q6PD62 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTR9Q6PD62 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 RNU4-68P-201ENST00000364314 141 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 RNU4-47P-201ENST00000410876 114 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 AL592310.1-201ENST00000414330 671 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 HMGB3P23-201ENST00000414981 585 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 SSR1P2-201ENST00000415208 787 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 NUP35P2-201ENST00000416748 943 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 AC012065.2-201ENST00000421295 375 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 AL513175.2-201ENST00000422071 443 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 BX890604.2-201ENST00000427883 474 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 AL353705.1-201ENST00000433468 480 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 RPS27AP1-201ENST00000475545 471 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 VPS26AP1-201ENST00000483197 979 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 AC020699.1-201ENST00000505161 445 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 AC113347.3-201ENST00000509113 148 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 SNORA74D-201ENST00000516404 141 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 MTND1P24-201ENST00000552175 861 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 AC022069.1-201ENST00000582910 658 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 AL355816.2-201ENST00000610049 647 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 AC026422.1-201ENST00000623961 452 ntBASIC3.86□□□□□ -1.79
CTR9Q6PD62 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTR9Q6PD62 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CTR9Q6PD62 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTR9Q6PD62 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CTR9Q6PD62 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CTR9Q6PD62 RNA5SP374-201ENST00000362939 125 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 AL133264.1-201ENST00000407157 562 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 AC006028.1-201ENST00000438379 402 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 AC093155.1-201ENST00000440164 826 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 EEF1A1P39-201ENST00000440791 250 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 RPL31P13-201ENST00000484151 370 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 AP000790.1-201ENST00000528891 737 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 AC023813.2-201ENST00000564321 469 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 HSPE1P14-201ENST00000605812 302 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 AC004832.5-201ENST00000608677 401 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 AL157817.1-201ENST00000614264 790 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.85□□□□□ -1.79
CTR9Q6PD62 AC068787.1-201ENST00000623908 691 ntBASIC3.85□□□□□ -1.79
CTR9Q6PD62 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CTR9Q6PD62 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CTR9Q6PD62 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CTR9Q6PD62 MIR148B-201ENST00000362252 99 ntBASIC3.84□□□□□ -1.79
CTR9Q6PD62 RNU6-115P-201ENST00000364310 107 ntBASIC3.84□□□□□ -1.79
CTR9Q6PD62 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.84□□□□□ -1.79
CTR9Q6PD62 MIR607-201ENST00000385241 96 ntBASIC3.84□□□□□ -1.79
CTR9Q6PD62 ERHP2-201ENST00000402323 299 ntBASIC3.84□□□□□ -1.79
CTR9Q6PD62 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CTR9Q6PD62 RN7SKP123-201ENST00000410732 291 ntBASIC3.84□□□□□ -1.79
CTR9Q6PD62 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CTR9Q6PD62 AC007435.1-201ENST00000421086 415 ntBASIC3.84□□□□□ -1.79
CTR9Q6PD62 RPL7P44-201ENST00000424827 742 ntBASIC3.84□□□□□ -1.79
CTR9Q6PD62 AL512649.1-201ENST00000428997 581 ntBASIC3.84□□□□□ -1.79
CTR9Q6PD62 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.84□□□□□ -1.79
CTR9Q6PD62 HMGB1P12-201ENST00000438594 598 ntBASIC3.84□□□□□ -1.79
CTR9Q6PD62 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.84□□□□□ -1.79
CTR9Q6PD62 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms