Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 OR4G1P-203ENST00000641984 1631 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 MIR1-2-201ENST00000384961 85 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 RNU1-82P-201ENST00000390851 165 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 MTCO3P12-201ENST00000416718 547 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AC140479.3-201ENST00000418944 1126 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AL031736.2-201ENST00000426573 787 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 KCTD9P3-201ENST00000434597 1169 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 CYCSP34-201ENST00000458172 304 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 snoU13.8-201ENST00000458890 104 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 MRPS17P3-201ENST00000465453 385 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 RNA5SP337-201ENST00000517007 109 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AC090572.1-201ENST00000519251 160 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 OR4T1P-201ENST00000554933 911 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AC068790.3-201ENST00000602988 553 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 RPL23AP92-201ENST00000603609 255 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AL133255.1-201ENST00000606374 441 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AL365204.3-201ENST00000612448 685 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AC015914.2-201ENST00000618167 288 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AC022106.2-201ENST00000620114 757 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 AC090617.10-201ENST00000624308 134 ntBASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PRPF40BQ6NWY9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC097714.1-201ENST00000511272 1647 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 TLK1P1-201ENST00000456760 2440 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 Y_RNA.384-201ENST00000383909 102 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 RNU6-1207P-201ENST00000384343 107 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 MIR134-201ENST00000385258 73 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 RN7SKP235-201ENST00000410662 305 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 CTSL3P-202ENST00000412179 788 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AL591848.1-201ENST00000413092 322 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 RPL6P29-201ENST00000414863 865 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AL353729.1-201ENST00000425044 720 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 RPS17P8-201ENST00000434525 335 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 MTND6P18-201ENST00000439477 513 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 PLGLA-201ENST00000465668 449 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 RPL38P4-201ENST00000502376 214 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC107953.1-201ENST00000522216 297 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 RN7SL652P-201ENST00000577769 300 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC002550.2-201ENST00000621246 394 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AL356585.4-201ENST00000623078 1229 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 AC104118.1-201ENST00000607625 1589 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 IQCB2P-201ENST00000401788 1633 ntBASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRPF40BQ6NWY9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 RPL7P26-201ENST00000333817 754 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 RNU6-97P-201ENST00000363387 104 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 Y_RNA.255-201ENST00000364581 97 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 MIR23B-201ENST00000384832 97 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 RPL7P60-201ENST00000397636 735 ntBASIC5.87□□□□□ -1.47
PRPF40BQ6NWY9 AC069218.2-201ENST00000411665 344 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms