Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC079804.1-201ENST00000461922 436 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC004801.2-202ENST00000463559 283 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 RN7SL443P-201ENST00000464331 290 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 Y_RNA.654-201ENST00000497848 106 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 DEFB109D-201ENST00000529497 240 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 MIR4790-201ENST00000577799 79 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 SDR42E1P1-201ENST00000611327 477 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 DUSP12P1-201ENST00000612874 516 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 uc_338.11-201ENST00000619132 160 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AP000550.3-201ENST00000637734 379 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 OR52H1-202ENST00000641796 1061 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL034549.2-201ENST00000618285 3373 ntBASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DQA1Q5Y7H0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 OR5P1P-201ENST00000299512 925 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 U3.2-201ENST00000362981 210 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 RNU6-61P-201ENST00000365528 109 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 ENSAP1-201ENST00000392855 326 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL356057.3-201ENST00000402607 340 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 RN7SKP158-201ENST00000410453 326 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 RNU2-47P-201ENST00000410649 186 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC079809.1-201ENST00000415468 276 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 RPS17P13-201ENST00000448974 407 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 HMGB3P22-202ENST00000451823 572 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 RN7SL222P-201ENST00000476452 299 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 RN7SL809P-201ENST00000482040 297 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC135721.1-201ENST00000497954 479 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC090136.1-201ENST00000520009 240 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL137161.1-201ENST00000532231 390 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC093012.1-202ENST00000549403 582 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 SNRPGP18-201ENST00000553000 214 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC100830.2-201ENST00000581636 240 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 MIR3672-201ENST00000584290 82 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 MIR4293-201ENST00000584305 78 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC022893.3-201ENST00000607665 437 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 AP001486.3-201ENST00000615334 372 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DQA1Q5Y7H0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms