Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AP001992.1-205ENST00000462248 379 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 GMFBP1-201ENST00000467831 427 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 RPS15AP36-201ENST00000492022 382 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 EIF4EP3-201ENST00000498782 656 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC093853.1-201ENST00000515689 483 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 SCARNA24.1-201ENST00000516465 137 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 RNU6-1220P-201ENST00000517126 108 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 CYCSP29-201ENST00000533731 318 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 LSM3P2-201ENST00000551246 273 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC011477.5-201ENST00000586571 259 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 VN1R85P-201ENST00000601587 426 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AL133255.1-201ENST00000606374 441 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 MIR6864-201ENST00000617935 70 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 AC005858.4-201ENST00000623191 700 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 MTND4P35-201ENST00000604257 1375 ntBASIC5.93□□□□□ -1.46
USPL1Q5W0Q7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 Y_RNA.67-201ENST00000362870 100 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 SNORA71.2-201ENST00000364941 134 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 RNU4-48P-201ENST00000365559 182 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 Y_RNA.384-201ENST00000383909 102 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 RNU6-1293P-201ENST00000384077 107 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 RNU2-62P-201ENST00000410868 191 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AL353678.1-201ENST00000422735 741 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AL451139.1-201ENST00000434718 346 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AL356276.2-201ENST00000435919 558 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 NUTF2P3-201ENST00000448540 384 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 RPL7P52-201ENST00000449200 742 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 NIPA2P5-201ENST00000452282 464 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 MRPS17P3-201ENST00000465453 385 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AC021382.1-201ENST00000483523 359 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 HSPD1P15-201ENST00000505573 1122 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 SNORD27.1-201ENST00000516319 72 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 RNU6-1045P-201ENST00000516321 107 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 Y_RNA.691-201ENST00000516611 103 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AC005868.1-201ENST00000536421 331 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 NF1P5-201ENST00000588287 448 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 BNIP3P22-201ENST00000593399 556 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AC123786.2-201ENST00000603459 275 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 ZYXP1-201ENST00000617638 118 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 RNU6-156P-201ENST00000621869 107 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AC090617.10-201ENST00000624308 134 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AP000843.1-201ENST00000624880 701 ntBASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USPL1Q5W0Q7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AL445437.1-201ENST00000623157 3087 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AP000756.2-201ENST00000624168 2567 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 MIR134-201ENST00000385258 73 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 AC092162.1-201ENST00000432828 434 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 KCTD9P3-201ENST00000434597 1169 ntBASIC5.91□□□□□ -1.46
USPL1Q5W0Q7 RPS20P5-201ENST00000434808 360 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms