Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL139132.1-201ENST00000431587 344 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 OR6C72P-201ENST00000451403 892 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 PRSS3P4-201ENST00000453323 162 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 AC074250.1-201ENST00000511117 192 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 AC092593.2-201ENST00000513866 913 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 RNA5SP282-201ENST00000516355 108 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.29□□□□□ -2.04
CCDC58Q4VC31 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC58Q4VC31 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC58Q4VC31 AL391156.1-201ENST00000554965 554 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 AC005412.1-201ENST00000580812 1049 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 AL020997.2-201ENST00000602607 184 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 AC119501.1-201ENST00000603646 475 ntBASIC2.29□□□□□ -2.04
CCDC58Q4VC31 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.29□□□□□ -2.04
CCDC58Q4VC31 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC58Q4VC31 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CCDC58Q4VC31 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CCDC58Q4VC31 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC58Q4VC31 RNU1-140P-201ENST00000365040 165 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 OR52E6-202ENST00000379946 954 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC58Q4VC31 SNORA6-201ENST00000384033 151 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 RNU6-185P-201ENST00000384421 107 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 RNU6-837P-201ENST00000391056 108 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC58Q4VC31 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC58Q4VC31 USP9YP20-201ENST00000419224 558 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC58Q4VC31 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC58Q4VC31 SETP11-201ENST00000473027 690 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 RPS29P26-201ENST00000477483 171 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC58Q4VC31 AC002456.2-201ENST00000509356 380 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 HIGD1AP13-201ENST00000509878 289 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC58Q4VC31 AP000889.2-201ENST00000532684 490 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 AMZ2P1-203ENST00000565833 850 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 MIR4658-201ENST00000584344 65 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 AC103881.1-201ENST00000603476 538 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 AC106028.5-201ENST00000610332 395 ntBASIC2.28□□□□□ -2.04
CCDC58Q4VC31 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC58Q4VC31 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC58Q4VC31 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.27□□□□□ -2.05
CCDC58Q4VC31 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
CCDC58Q4VC31 RNU6-1072P-201ENST00000384703 107 ntBASIC2.27□□□□□ -2.05
CCDC58Q4VC31 RNU6-443P-201ENST00000384780 107 ntBASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AJ239321.1-201ENST00000424255 564 ntBASIC2.27□□□□□ -2.05
CCDC58Q4VC31 RPL35AP12-201ENST00000425362 338 ntBASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AP001960.1-201ENST00000506494 658 ntBASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AC010374.2-201ENST00000512933 535 ntBASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AC034244.2-201ENST00000514668 858 ntBASIC2.27□□□□□ -2.05
CCDC58Q4VC31 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AL121603.1-201ENST00000553815 142 ntBASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 AC012314.7-201ENST00000619693 93 ntBASIC2.27□□□□□ -2.05
CCDC58Q4VC31 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC58Q4VC31 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 RNU1-112P-201ENST00000364401 164 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 SNORA1.3-201ENST00000384676 136 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 MIR34B-201ENST00000385076 84 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 UBA52P6-201ENST00000399822 382 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 RNU4-72P-201ENST00000410754 173 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 AC087499.2-201ENST00000432861 149 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 AL513321.1-201ENST00000441175 761 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 BUD31P2-201ENST00000449374 300 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 AL139109.1-201ENST00000455491 297 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 MTCYBP14-201ENST00000457471 715 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 AP001992.1-205ENST00000462248 379 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 FAM133DP-201ENST00000464802 691 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 AL121594.4-201ENST00000556211 1196 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 RPS3AP23-202ENST00000574601 686 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 AC112503.2-201ENST00000609005 552 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 AC084757.4-201ENST00000616350 526 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 CYP3A51P-201ENST00000633513 256 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 ZNF720P1-201ENST00000562403 1939 ntBASIC2.26□□□□□ -2.05
CCDC58Q4VC31 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.26□□□□□ -2.05
CCDC58Q4VC31 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms