Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.06□□□□□ -2.08
CACNA1EQ15878 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.06□□□□□ -2.08
CACNA1EQ15878 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.06□□□□□ -2.08
CACNA1EQ15878 AC069234.5-201ENST00000611056 416 ntBASIC2.06□□□□□ -2.08
CACNA1EQ15878 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CACNA1EQ15878 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CACNA1EQ15878 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CACNA1EQ15878 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.06□□□□□ -2.08
CACNA1EQ15878 SNORD114-26-201ENST00000363543 72 ntBASIC2.06□□□□□ -2.08
CACNA1EQ15878 SNORD6-201ENST00000365444 73 ntBASIC2.06□□□□□ -2.08
CACNA1EQ15878 SNORD21-201ENST00000383953 95 ntBASIC2.06□□□□□ -2.08
CACNA1EQ15878 AL445646.1-201ENST00000431784 216 ntBASIC2.06□□□□□ -2.08
CACNA1EQ15878 RN7SL283P-201ENST00000489055 303 ntBASIC2.06□□□□□ -2.08
CACNA1EQ15878 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.06□□□□□ -2.08
CACNA1EQ15878 RNA5SP480-201ENST00000516840 109 ntBASIC2.06□□□□□ -2.08
CACNA1EQ15878 VTA1P2-201ENST00000520205 911 ntBASIC2.06□□□□□ -2.08
CACNA1EQ15878 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.06□□□□□ -2.08
CACNA1EQ15878 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.06□□□□□ -2.08
CACNA1EQ15878 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.06□□□□□ -2.08
CACNA1EQ15878 MIR4255-201ENST00000579351 72 ntBASIC2.06□□□□□ -2.08
CACNA1EQ15878 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.06□□□□□ -2.08
CACNA1EQ15878 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CACNA1EQ15878 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 RNU6-707P-201ENST00000364647 95 ntBASIC2.05□□□□□ -2.08
CACNA1EQ15878 LUZP4P1-201ENST00000415420 344 ntBASIC2.05□□□□□ -2.08
CACNA1EQ15878 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 POU5F1P7-201ENST00000508759 541 ntBASIC2.05□□□□□ -2.08
CACNA1EQ15878 AC108078.2-201ENST00000510750 236 ntBASIC2.05□□□□□ -2.08
CACNA1EQ15878 AP003467.2-201ENST00000520175 319 ntBASIC2.05□□□□□ -2.08
CACNA1EQ15878 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 AMZ2P1-203ENST00000565833 850 ntBASIC2.05□□□□□ -2.08
CACNA1EQ15878 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CACNA1EQ15878 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CACNA1EQ15878 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 MIR613-201ENST00000385248 95 ntBASIC2.05□□□□□ -2.08
CACNA1EQ15878 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 GSTA11P-201ENST00000452866 669 ntBASIC2.05□□□□□ -2.08
CACNA1EQ15878 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.05□□□□□ -2.08
CACNA1EQ15878 ZNF542P-204ENST00000482727 1305 ntBASIC2.04□□□□□ -2.08
CACNA1EQ15878 AC245100.2-201ENST00000454544 1679 ntBASIC2.04□□□□□ -2.08
CACNA1EQ15878 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.04□□□□□ -2.08
CACNA1EQ15878 MTND4LP12-201ENST00000448237 295 ntBASIC2.04□□□□□ -2.08
CACNA1EQ15878 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC2.04□□□□□ -2.08
CACNA1EQ15878 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CACNA1EQ15878 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.04□□□□□ -2.08
CACNA1EQ15878 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.04□□□□□ -2.08
CACNA1EQ15878 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.04□□□□□ -2.08
CACNA1EQ15878 AL160394.1-201ENST00000624765 724 ntBASIC2.04□□□□□ -2.08
CACNA1EQ15878 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CACNA1EQ15878 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC2.03□□□□□ -2.08
CACNA1EQ15878 TRBV26-201ENST00000456572 344 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.03□□□□□ -2.08
CACNA1EQ15878 MIR4644-201ENST00000579929 84 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 AC023043.3-201ENST00000593113 385 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.03□□□□□ -2.08
CACNA1EQ15878 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.03□□□□□ -2.08
CACNA1EQ15878 MTCO1P14-201ENST00000441695 1559 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CACNA1EQ15878 BX005019.1-201ENST00000561881 1810 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.03□□□□□ -2.08
CACNA1EQ15878 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.03□□□□□ -2.08
CACNA1EQ15878 RPL21P18-201ENST00000469899 480 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 AC068781.1-201ENST00000488231 618 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 AC092045.1-201ENST00000495716 1231 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 AGGF1P8-201ENST00000562979 1000 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 AC012182.1-201ENST00000570133 895 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 AL022099.1-201ENST00000604551 712 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 AC107294.3-201ENST00000609211 526 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 AC002064.3-201ENST00000623448 346 ntBASIC2.03□□□□□ -2.08
CACNA1EQ15878 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CACNA1EQ15878 GSTA12P-201ENST00000402398 508 ntBASIC2.02□□□□□ -2.09
CACNA1EQ15878 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
CACNA1EQ15878 RNU7-170P-201ENST00000459303 61 ntBASIC2.02□□□□□ -2.09
CACNA1EQ15878 AC092185.1-201ENST00000491371 97 ntBASIC2.02□□□□□ -2.09
CACNA1EQ15878 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.02□□□□□ -2.09
CACNA1EQ15878 AC011611.5-201ENST00000552477 578 ntBASIC2.02□□□□□ -2.09
CACNA1EQ15878 AP005136.1-201ENST00000579765 429 ntBASIC2.02□□□□□ -2.09
CACNA1EQ15878 MIR3199-1-201ENST00000582434 88 ntBASIC2.02□□□□□ -2.09
CACNA1EQ15878 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.02□□□□□ -2.09
CACNA1EQ15878 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.02□□□□□ -2.09
CACNA1EQ15878 AC120053.1-201ENST00000607706 736 ntBASIC2.02□□□□□ -2.09
CACNA1EQ15878 VN1R7P-201ENST00000619242 903 ntBASIC2.02□□□□□ -2.09
CACNA1EQ15878 AC244517.12-201ENST00000623581 663 ntBASIC2.02□□□□□ -2.09
CACNA1EQ15878 MTND5P27-201ENST00000428871 1720 ntBASIC2.02□□□□□ -2.09
CACNA1EQ15878 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.02□□□□□ -2.09
CACNA1EQ15878 RN7SKP226-201ENST00000364912 300 ntBASIC2.02□□□□□ -2.09
CACNA1EQ15878 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.02□□□□□ -2.09
CACNA1EQ15878 AC026412.2-201ENST00000512270 1075 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms