Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
EFNB3Q15768 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
EFNB3Q15768 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
EFNB3Q15768 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
EFNB3Q15768 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
EFNB3Q15768 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
EFNB3Q15768 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
EFNB3Q15768 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
EFNB3Q15768 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
EFNB3Q15768 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
EFNB3Q15768 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
EFNB3Q15768 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
EFNB3Q15768 Y_RNA.46-201ENST00000362695 102 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 RNA5SP167-201ENST00000365461 116 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
EFNB3Q15768 AL583835.1-201ENST00000399570 407 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 RPL7P25-201ENST00000404151 721 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 RNA5SP36-201ENST00000410197 133 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 Y_RNA.599-201ENST00000410489 109 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 RNU2-66P-201ENST00000410650 161 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 MIR1911-201ENST00000410783 80 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 RN7SKP263-201ENST00000411194 309 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 AL359704.1-201ENST00000411586 781 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 RPS3AP3-201ENST00000411933 242 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AC245052.5-201ENST00000416320 649 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 RPS3AP44-201ENST00000425466 790 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 AC010975.2-201ENST00000427781 588 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 RPEP2-201ENST00000432149 701 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
EFNB3Q15768 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AL031667.1-201ENST00000440222 725 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 PGBD4P3-201ENST00000440731 581 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AL353691.1-201ENST00000451332 387 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.64□□□□□ -1.83
EFNB3Q15768 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 RPS7P7-201ENST00000463499 571 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 KLF3P2-201ENST00000465138 268 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 AL672167.3-201ENST00000465951 960 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 AC021382.1-201ENST00000483523 359 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 AC096751.1-202ENST00000502691 1067 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 BNIP3P41-201ENST00000503774 571 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.64□□□□□ -1.83
EFNB3Q15768 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
EFNB3Q15768 PTGES3P3-201ENST00000511479 482 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 Vault.1-201ENST00000516474 102 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 RNU6-201P-201ENST00000517100 61 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.64□□□□□ -1.83
EFNB3Q15768 RPL21P5-201ENST00000554662 472 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.64□□□□□ -1.83
EFNB3Q15768 BNIP3P5-201ENST00000562290 498 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.64□□□□□ -1.83
EFNB3Q15768 MIR3682-201ENST00000581338 84 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AC073648.5-201ENST00000603502 305 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 RNA5SP108-201ENST00000605921 117 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 AC103710.1-201ENST00000610003 901 ntBASIC3.64□□□□□ -1.83
EFNB3Q15768 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
EFNB3Q15768 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.64□□□□□ -1.83
EFNB3Q15768 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
EFNB3Q15768 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
EFNB3Q15768 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
EFNB3Q15768 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
EFNB3Q15768 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
EFNB3Q15768 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.64□□□□□ -1.83
EFNB3Q15768 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
EFNB3Q15768 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.63□□□□□ -1.83
EFNB3Q15768 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.63□□□□□ -1.83
EFNB3Q15768 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
EFNB3Q15768 RNU6-989P-201ENST00000362756 107 ntBASIC3.63□□□□□ -1.83
EFNB3Q15768 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
EFNB3Q15768 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
EFNB3Q15768 RPS20P2-201ENST00000402520 389 ntBASIC3.63□□□□□ -1.83
EFNB3Q15768 LAP3P1-201ENST00000403648 294 ntBASIC3.63□□□□□ -1.83
EFNB3Q15768 RNA5SP317-201ENST00000410176 116 ntBASIC3.63□□□□□ -1.83
EFNB3Q15768 RN7SKP33-201ENST00000410942 340 ntBASIC3.63□□□□□ -1.83
EFNB3Q15768 Y_RNA.619-201ENST00000410951 90 ntBASIC3.63□□□□□ -1.83
EFNB3Q15768 RNA5SP311-201ENST00000411290 116 ntBASIC3.63□□□□□ -1.83
EFNB3Q15768 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.63□□□□□ -1.83
EFNB3Q15768 MTCO1P21-201ENST00000416634 589 ntBASIC3.63□□□□□ -1.83
EFNB3Q15768 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms