Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.88□□□□□ -1.63
YBX1P67809 AC128657.1-201ENST00000549459 145 ntBASIC4.88□□□□□ -1.63
YBX1P67809 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.88□□□□□ -1.63
YBX1P67809 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.88□□□□□ -1.63
YBX1P67809 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.88□□□□□ -1.63
YBX1P67809 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.88□□□□□ -1.63
YBX1P67809 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.88□□□□□ -1.63
YBX1P67809 MIR4646-201ENST00000580775 63 ntBASIC4.88□□□□□ -1.63
YBX1P67809 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.88□□□□□ -1.63
YBX1P67809 AL022099.1-201ENST00000604551 712 ntBASIC4.88□□□□□ -1.63
YBX1P67809 AP000654.2-201ENST00000605633 586 ntBASIC4.88□□□□□ -1.63
YBX1P67809 AL121992.2-201ENST00000606262 256 ntBASIC4.88□□□□□ -1.63
YBX1P67809 AC005014.2-201ENST00000607795 599 ntBASIC4.88□□□□□ -1.63
YBX1P67809 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
YBX1P67809 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.88□□□□□ -1.63
YBX1P67809 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.88□□□□□ -1.63
YBX1P67809 CR392039.4-201ENST00000624968 501 ntBASIC4.88□□□□□ -1.63
YBX1P67809 GVINP1-202ENST00000531871 7271 ntBASIC4.88□□□□□ -1.63
YBX1P67809 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
YBX1P67809 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.88□□□□□ -1.63
YBX1P67809 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.88□□□□□ -1.63
YBX1P67809 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
YBX1P67809 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
YBX1P67809 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.88□□□□□ -1.63
YBX1P67809 AL672167.1-205ENST00000641112 3080 ntBASIC4.88□□□□□ -1.63
YBX1P67809 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.88□□□□□ -1.63
YBX1P67809 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.87□□□□□ -1.63
YBX1P67809 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
YBX1P67809 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
YBX1P67809 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
YBX1P67809 SALL4P2-201ENST00000423288 2910 ntBASIC4.87□□□□□ -1.63
YBX1P67809 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
YBX1P67809 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
YBX1P67809 RNY3P13-201ENST00000365542 102 ntBASIC4.87□□□□□ -1.63
YBX1P67809 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
YBX1P67809 RNU6-178P-201ENST00000384631 104 ntBASIC4.87□□□□□ -1.63
YBX1P67809 MIR548K-201ENST00000408406 116 ntBASIC4.87□□□□□ -1.63
YBX1P67809 SNORA77-201ENST00000408716 125 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.87□□□□□ -1.63
YBX1P67809 FAR2P2-201ENST00000413041 594 ntBASIC4.87□□□□□ -1.63
YBX1P67809 RPL31P45-201ENST00000419532 356 ntBASIC4.87□□□□□ -1.63
YBX1P67809 MTCYBP10-201ENST00000424905 650 ntBASIC4.87□□□□□ -1.63
YBX1P67809 FAR2P4-202ENST00000425399 584 ntBASIC4.87□□□□□ -1.63
YBX1P67809 MTCYBP9-201ENST00000431021 303 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AC006466.1-201ENST00000438721 289 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AL137792.2-201ENST00000443484 235 ntBASIC4.87□□□□□ -1.63
YBX1P67809 CYCSP24-201ENST00000445119 316 ntBASIC4.87□□□□□ -1.63
YBX1P67809 PRPS1P1-201ENST00000445305 876 ntBASIC4.87□□□□□ -1.63
YBX1P67809 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.87□□□□□ -1.63
YBX1P67809 KNOP1P3-201ENST00000446933 426 ntBASIC4.87□□□□□ -1.63
YBX1P67809 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.87□□□□□ -1.63
YBX1P67809 TRBV26-201ENST00000456572 344 ntBASIC4.87□□□□□ -1.63
YBX1P67809 snoU13.20-201ENST00000459180 104 ntBASIC4.87□□□□□ -1.63
YBX1P67809 RPS29P22-201ENST00000472363 168 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AC126389.1-201ENST00000477436 290 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.87□□□□□ -1.63
YBX1P67809 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.87□□□□□ -1.63
YBX1P67809 RPL39P5-202ENST00000512505 151 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AC012339.2-201ENST00000523996 453 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AP001804.3-201ENST00000525146 880 ntBASIC4.87□□□□□ -1.63
YBX1P67809 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.87□□□□□ -1.63
YBX1P67809 PTP4A1P6-201ENST00000531034 478 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AC005868.1-201ENST00000536421 331 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.87□□□□□ -1.63
YBX1P67809 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.87□□□□□ -1.63
YBX1P67809 AC053481.3-201ENST00000577881 843 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AC060771.1-201ENST00000582031 164 ntBASIC4.87□□□□□ -1.63
YBX1P67809 MIR3942-201ENST00000585264 109 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.87□□□□□ -1.63
YBX1P67809 AC007938.3-201ENST00000604965 623 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AC133644.2-201ENST00000608142 540 ntBASIC4.87□□□□□ -1.63
YBX1P67809 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.87□□□□□ -1.63
YBX1P67809 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.87□□□□□ -1.63
YBX1P67809 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.87□□□□□ -1.63
YBX1P67809 uc_338.12-201ENST00000616344 181 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AC007546.1-201ENST00000619452 559 ntBASIC4.87□□□□□ -1.63
YBX1P67809 RMST_9.1-201ENST00000619945 193 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AC000123.2-201ENST00000623124 461 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AL159972.1-201ENST00000625150 448 ntBASIC4.87□□□□□ -1.63
YBX1P67809 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.87□□□□□ -1.63
YBX1P67809 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.87□□□□□ -1.63
YBX1P67809 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
YBX1P67809 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
YBX1P67809 AC104623.2-202ENST00000623477 4002 ntBASIC4.87□□□□□ -1.63
YBX1P67809 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
YBX1P67809 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.87□□□□□ -1.63
YBX1P67809 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
YBX1P67809 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
YBX1P67809 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
YBX1P67809 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
YBX1P67809 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
YBX1P67809 AC125336.1-201ENST00000508893 2827 ntBASIC4.87□□□□□ -1.63
YBX1P67809 AC004972.1-201ENST00000623934 2209 ntBASIC4.87□□□□□ -1.63
YBX1P67809 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
YBX1P67809 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
YBX1P67809 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
YBX1P67809 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
YBX1P67809 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
YBX1P67809 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.86□□□□□ -1.63
YBX1P67809 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms