Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 HSPE1P22-201ENST00000456856 327 ntBASIC1.32□□□□□ -2.2
RPL39P62891 PPP1R2P5-201ENST00000457256 603 ntBASIC1.32□□□□□ -2.2
RPL39P62891 SNORD108-201ENST00000459332 71 ntBASIC1.32□□□□□ -2.2
RPL39P62891 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.32□□□□□ -2.2
RPL39P62891 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC1.32□□□□□ -2.2
RPL39P62891 AC114781.4-201ENST00000513707 639 ntBASIC1.32□□□□□ -2.2
RPL39P62891 AC087808.1-201ENST00000520501 361 ntBASIC1.32□□□□□ -2.2
RPL39P62891 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.32□□□□□ -2.2
RPL39P62891 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.32□□□□□ -2.2
RPL39P62891 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.32□□□□□ -2.2
RPL39P62891 AC024614.2-201ENST00000577584 372 ntBASIC1.32□□□□□ -2.2
RPL39P62891 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.32□□□□□ -2.2
RPL39P62891 AL161756.2-201ENST00000604597 246 ntBASIC1.32□□□□□ -2.2
RPL39P62891 AC005000.2-201ENST00000605468 310 ntBASIC1.32□□□□□ -2.2
RPL39P62891 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
RPL39P62891 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.32□□□□□ -2.2
RPL39P62891 AC244517.12-201ENST00000623581 663 ntBASIC1.32□□□□□ -2.2
RPL39P62891 CR392039.4-201ENST00000624968 501 ntBASIC1.32□□□□□ -2.2
RPL39P62891 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.32□□□□□ -2.2
RPL39P62891 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.32□□□□□ -2.2
RPL39P62891 KPNA2P1-201ENST00000458289 1591 ntBASIC1.32□□□□□ -2.2
RPL39P62891 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.32□□□□□ -2.2
RPL39P62891 AL136360.1-201ENST00000503377 1900 ntBASIC1.31□□□□□ -2.2
RPL39P62891 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
RPL39P62891 XGY1-201ENST00000381172 446 ntBASIC1.31□□□□□ -2.2
RPL39P62891 SNORA67.3-201ENST00000384366 140 ntBASIC1.31□□□□□ -2.2
RPL39P62891 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.31□□□□□ -2.2
RPL39P62891 MTND4LP13-201ENST00000425022 298 ntBASIC1.31□□□□□ -2.2
RPL39P62891 AC073069.1-201ENST00000428657 441 ntBASIC1.31□□□□□ -2.2
RPL39P62891 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.31□□□□□ -2.2
RPL39P62891 AL590103.1-201ENST00000434488 307 ntBASIC1.31□□□□□ -2.2
RPL39P62891 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.31□□□□□ -2.2
RPL39P62891 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.31□□□□□ -2.2
RPL39P62891 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RPL39P62891 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC1.31□□□□□ -2.2
RPL39P62891 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.31□□□□□ -2.2
RPL39P62891 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.31□□□□□ -2.2
RPL39P62891 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.31□□□□□ -2.2
RPL39P62891 RPPH1-2P-201ENST00000516688 293 ntBASIC1.31□□□□□ -2.2
RPL39P62891 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RPL39P62891 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.31□□□□□ -2.2
RPL39P62891 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RPL39P62891 MIR3122-201ENST00000577243 73 ntBASIC1.31□□□□□ -2.2
RPL39P62891 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.31□□□□□ -2.2
RPL39P62891 AL390838.2-201ENST00000602394 274 ntBASIC1.31□□□□□ -2.2
RPL39P62891 AC012493.3-201ENST00000604494 112 ntBASIC1.31□□□□□ -2.2
RPL39P62891 AC103710.1-201ENST00000610003 901 ntBASIC1.31□□□□□ -2.2
RPL39P62891 BANCR-201ENST00000624238 473 ntTSL 2 BASIC1.31□□□□□ -2.2
RPL39P62891 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
RPL39P62891 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RPL39P62891 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RPL39P62891 SNORA64-201ENST00000384674 134 ntBASIC1.3□□□□□ -2.2
RPL39P62891 U3.40-201ENST00000408706 208 ntBASIC1.3□□□□□ -2.2
RPL39P62891 LSM1P1-201ENST00000438629 273 ntBASIC1.3□□□□□ -2.2
RPL39P62891 IPO7P1-201ENST00000442031 636 ntBASIC1.3□□□□□ -2.2
RPL39P62891 AC009237.8-201ENST00000445492 379 ntBASIC1.3□□□□□ -2.2
RPL39P62891 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.3□□□□□ -2.2
RPL39P62891 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.3□□□□□ -2.2
RPL39P62891 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
RPL39P62891 AC135999.1-201ENST00000478962 479 ntBASIC1.3□□□□□ -2.2
RPL39P62891 RPL23AP41-201ENST00000484754 458 ntBASIC1.3□□□□□ -2.2
RPL39P62891 MRPL42P6-201ENST00000486397 371 ntBASIC1.3□□□□□ -2.2
RPL39P62891 OR5H5P-201ENST00000503164 928 ntBASIC1.3□□□□□ -2.2
RPL39P62891 AC008716.1-201ENST00000511084 513 ntBASIC1.3□□□□□ -2.2
RPL39P62891 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.3□□□□□ -2.2
RPL39P62891 MTCO1P47-201ENST00000523889 1271 ntBASIC1.3□□□□□ -2.2
RPL39P62891 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.3□□□□□ -2.2
RPL39P62891 OR4V1P-201ENST00000525394 1140 ntBASIC1.3□□□□□ -2.2
RPL39P62891 OR5AQ1P-201ENST00000527596 927 ntBASIC1.3□□□□□ -2.2
RPL39P62891 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RPL39P62891 AC009097.3-201ENST00000563557 1018 ntBASIC1.3□□□□□ -2.2
RPL39P62891 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.3□□□□□ -2.2
RPL39P62891 MIR4419B-201ENST00000577260 68 ntBASIC1.3□□□□□ -2.2
RPL39P62891 MIR3200-201ENST00000580767 85 ntBASIC1.3□□□□□ -2.2
RPL39P62891 AL356280.1-201ENST00000603614 379 ntBASIC1.3□□□□□ -2.2
RPL39P62891 AL392048.1-201ENST00000613946 534 ntBASIC1.3□□□□□ -2.2
RPL39P62891 YWHAEP7-203ENST00000622054 312 ntBASIC1.3□□□□□ -2.2
RPL39P62891 AC090897.3-201ENST00000636973 1157 ntBASIC1.3□□□□□ -2.2
RPL39P62891 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
RPL39P62891 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.3□□□□□ -2.2
RPL39P62891 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.3□□□□□ -2.2
RPL39P62891 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
RPL39P62891 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC1.29□□□□□ -2.2
RPL39P62891 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RPL39P62891 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.29□□□□□ -2.2
RPL39P62891 SNORA31-201ENST00000362607 130 ntBASIC1.29□□□□□ -2.2
RPL39P62891 RNA5SP387-201ENST00000364226 106 ntBASIC1.29□□□□□ -2.2
RPL39P62891 Y_RNA.333-201ENST00000365274 102 ntBASIC1.29□□□□□ -2.2
RPL39P62891 MIR124-3-201ENST00000384866 87 ntBASIC1.29□□□□□ -2.2
RPL39P62891 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.29□□□□□ -2.2
RPL39P62891 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.29□□□□□ -2.2
RPL39P62891 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.29□□□□□ -2.2
RPL39P62891 RPS7P5-201ENST00000441482 581 ntBASIC1.29□□□□□ -2.2
RPL39P62891 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.29□□□□□ -2.2
RPL39P62891 TPT1P14-201ENST00000448018 505 ntBASIC1.29□□□□□ -2.2
RPL39P62891 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
RPL39P62891 HMGN2P13-201ENST00000476476 274 ntBASIC1.29□□□□□ -2.2
RPL39P62891 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC1.29□□□□□ -2.2
RPL39P62891 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC1.29□□□□□ -2.2
RPL39P62891 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms