Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 XIAPP1-201ENST00000603162 600 ntBASIC2.04□□□□□ -2.08
LSM3P62310 HMGB1P51-201ENST00000605166 638 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AL159169.3-201ENST00000608871 561 ntBASIC2.04□□□□□ -2.08
LSM3P62310 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LSM3P62310 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.04□□□□□ -2.08
LSM3P62310 AC018755.4-201ENST00000619715 454 ntBASIC2.04□□□□□ -2.08
LSM3P62310 U4.3-201ENST00000621047 82 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AC095031.1-201ENST00000623685 672 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AC011460.1-201ENST00000636268 1834 ntBASIC2.04□□□□□ -2.08
LSM3P62310 AC091564.4-201ENST00000533934 2194 ntBASIC2.03□□□□□ -2.08
LSM3P62310 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
LSM3P62310 PABPC1P9-201ENST00000426076 1612 ntBASIC2.03□□□□□ -2.08
LSM3P62310 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.03□□□□□ -2.08
LSM3P62310 AC093536.2-201ENST00000565257 1406 ntBASIC2.03□□□□□ -2.08
LSM3P62310 AC022031.1-201ENST00000585985 2593 ntBASIC2.03□□□□□ -2.08
LSM3P62310 OR5H2-201ENST00000355273 945 ntBASIC2.03□□□□□ -2.08
LSM3P62310 MIR27B-201ENST00000385129 97 ntBASIC2.03□□□□□ -2.08
LSM3P62310 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.03□□□□□ -2.08
LSM3P62310 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.03□□□□□ -2.08
LSM3P62310 MORF4L1P6-201ENST00000418771 268 ntBASIC2.03□□□□□ -2.08
LSM3P62310 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.03□□□□□ -2.08
LSM3P62310 PTP4A1P3-201ENST00000433661 420 ntBASIC2.03□□□□□ -2.08
LSM3P62310 AC023512.1-201ENST00000444513 499 ntBASIC2.03□□□□□ -2.08
LSM3P62310 AC079804.2-201ENST00000490376 200 ntBASIC2.03□□□□□ -2.08
LSM3P62310 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.03□□□□□ -2.08
LSM3P62310 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LSM3P62310 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.03□□□□□ -2.08
LSM3P62310 RNA5SP320-201ENST00000516263 124 ntBASIC2.03□□□□□ -2.08
LSM3P62310 RN7SKP40-201ENST00000517211 242 ntBASIC2.03□□□□□ -2.08
LSM3P62310 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.03□□□□□ -2.08
LSM3P62310 AC022080.3-201ENST00000544433 482 ntBASIC2.03□□□□□ -2.08
LSM3P62310 AL049874.4-201ENST00000557593 255 ntBASIC2.03□□□□□ -2.08
LSM3P62310 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.03□□□□□ -2.08
LSM3P62310 AC105137.2-201ENST00000569073 466 ntBASIC2.03□□□□□ -2.08
LSM3P62310 MIR5194-201ENST00000582634 120 ntBASIC2.03□□□□□ -2.08
LSM3P62310 OR4G1P-201ENST00000588632 938 ntBASIC2.03□□□□□ -2.08
LSM3P62310 AC125494.3-201ENST00000602759 455 ntBASIC2.03□□□□□ -2.08
LSM3P62310 MIR6748-201ENST00000610433 71 ntBASIC2.03□□□□□ -2.08
LSM3P62310 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LSM3P62310 AP004607.9-201ENST00000618202 316 ntBASIC2.03□□□□□ -2.08
LSM3P62310 AC002064.3-201ENST00000623448 346 ntBASIC2.03□□□□□ -2.08
LSM3P62310 AP003122.6-201ENST00000623831 495 ntBASIC2.03□□□□□ -2.08
LSM3P62310 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.03□□□□□ -2.08
LSM3P62310 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LSM3P62310 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
LSM3P62310 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LSM3P62310 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LSM3P62310 SNORA62.3-201ENST00000365110 153 ntBASIC2.02□□□□□ -2.09
LSM3P62310 RNA5SP37-201ENST00000365420 130 ntBASIC2.02□□□□□ -2.09
LSM3P62310 Y_RNA.493-201ENST00000384422 102 ntBASIC2.02□□□□□ -2.09
LSM3P62310 AL121972.1-201ENST00000402023 252 ntBASIC2.02□□□□□ -2.09
LSM3P62310 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LSM3P62310 MORF4L1P7-201ENST00000426038 703 ntBASIC2.02□□□□□ -2.09
LSM3P62310 AC091390.3-201ENST00000426478 338 ntBASIC2.02□□□□□ -2.09
LSM3P62310 MTATP6P11-201ENST00000428071 670 ntBASIC2.02□□□□□ -2.09
LSM3P62310 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.02□□□□□ -2.09
LSM3P62310 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.02□□□□□ -2.09
LSM3P62310 SNRPEP4-201ENST00000435815 279 ntBASIC2.02□□□□□ -2.09
LSM3P62310 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.02□□□□□ -2.09
LSM3P62310 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.02□□□□□ -2.09
LSM3P62310 AC104689.1-201ENST00000473356 768 ntBASIC2.02□□□□□ -2.09
LSM3P62310 AC107398.1-201ENST00000486904 505 ntBASIC2.02□□□□□ -2.09
LSM3P62310 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.02□□□□□ -2.09
LSM3P62310 AC105914.1-201ENST00000511798 226 ntBASIC2.02□□□□□ -2.09
LSM3P62310 AC108120.2-201ENST00000512973 294 ntBASIC2.02□□□□□ -2.09
LSM3P62310 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LSM3P62310 AC004923.2-201ENST00000529649 369 ntBASIC2.02□□□□□ -2.09
LSM3P62310 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.02□□□□□ -2.09
LSM3P62310 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.02□□□□□ -2.09
LSM3P62310 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.02□□□□□ -2.09
LSM3P62310 AC009163.5-201ENST00000575421 637 ntBASIC2.02□□□□□ -2.09
LSM3P62310 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.02□□□□□ -2.09
LSM3P62310 AC090616.3-201ENST00000582184 217 ntBASIC2.02□□□□□ -2.09
LSM3P62310 AC010615.3-201ENST00000597319 394 ntBASIC2.02□□□□□ -2.09
LSM3P62310 YPEL5P2-201ENST00000605553 359 ntBASIC2.02□□□□□ -2.09
LSM3P62310 VIS1.1-201ENST00000610517 203 ntBASIC2.02□□□□□ -2.09
LSM3P62310 AC013562.2-201ENST00000611632 603 ntBASIC2.02□□□□□ -2.09
LSM3P62310 NF1P10-201ENST00000613227 742 ntBASIC2.02□□□□□ -2.09
LSM3P62310 VN1R74P-201ENST00000613259 503 ntBASIC2.02□□□□□ -2.09
LSM3P62310 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.02□□□□□ -2.09
LSM3P62310 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
LSM3P62310 NSRP1P1-201ENST00000444067 1693 ntBASIC2.02□□□□□ -2.09
LSM3P62310 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.02□□□□□ -2.09
LSM3P62310 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.02□□□□□ -2.09
LSM3P62310 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
LSM3P62310 Z82209.1-201ENST00000422141 2135 ntBASIC2.02□□□□□ -2.09
LSM3P62310 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LSM3P62310 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM3P62310 MTND4P1-201ENST00000457501 1466 ntBASIC2.01□□□□□ -2.09
LSM3P62310 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.01□□□□□ -2.09
LSM3P62310 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.01□□□□□ -2.09
LSM3P62310 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM3P62310 RNU6-1243P-201ENST00000364028 107 ntBASIC2.01□□□□□ -2.09
LSM3P62310 RNA5SP160-201ENST00000364866 120 ntBASIC2.01□□□□□ -2.09
LSM3P62310 AL360182.1-201ENST00000397433 468 ntBASIC2.01□□□□□ -2.09
LSM3P62310 AL139039.1-201ENST00000401900 692 ntBASIC2.01□□□□□ -2.09
LSM3P62310 AL591416.1-201ENST00000404015 867 ntBASIC2.01□□□□□ -2.09
LSM3P62310 PRRC2CP1-201ENST00000404428 159 ntBASIC2.01□□□□□ -2.09
LSM3P62310 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.01□□□□□ -2.09
LSM3P62310 AL513477.1-202ENST00000417061 214 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms