Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC092325.1-201ENST00000566449 554 ntBASIC3.2□□□□□ -1.9
LMO4P61968 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO4P61968 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO4P61968 MIR548S-201ENST00000581352 82 ntBASIC3.2□□□□□ -1.9
LMO4P61968 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.2□□□□□ -1.9
LMO4P61968 MIR548AB-201ENST00000584917 84 ntBASIC3.2□□□□□ -1.9
LMO4P61968 AC020914.6-201ENST00000594327 272 ntBASIC3.2□□□□□ -1.9
LMO4P61968 AC024220.1-201ENST00000603675 484 ntBASIC3.2□□□□□ -1.9
LMO4P61968 AL049634.3-201ENST00000604968 457 ntBASIC3.2□□□□□ -1.9
LMO4P61968 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.2□□□□□ -1.9
LMO4P61968 MTND5P3-201ENST00000438536 1800 ntBASIC3.2□□□□□ -1.9
LMO4P61968 MAPK10-372ENST00000641954 3413 ntBASIC3.2□□□□□ -1.9
LMO4P61968 MTCO1P24-201ENST00000515438 1558 ntBASIC3.2□□□□□ -1.9
LMO4P61968 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LMO4P61968 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LMO4P61968 PNPT1P2-201ENST00000456768 2050 ntBASIC3.2□□□□□ -1.9
LMO4P61968 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LMO4P61968 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO4P61968 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LMO4P61968 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO4P61968 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO4P61968 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO4P61968 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LMO4P61968 RPL21P132-201ENST00000331267 462 ntBASIC3.19□□□□□ -1.9
LMO4P61968 Y_RNA.88-201ENST00000363029 99 ntBASIC3.19□□□□□ -1.9
LMO4P61968 SNORA5A-201ENST00000384111 134 ntBASIC3.19□□□□□ -1.9
LMO4P61968 RNU6-1042P-201ENST00000384204 107 ntBASIC3.19□□□□□ -1.9
LMO4P61968 RPL21P17-201ENST00000397467 475 ntBASIC3.19□□□□□ -1.9
LMO4P61968 RN7SKP177-201ENST00000410567 355 ntBASIC3.19□□□□□ -1.9
LMO4P61968 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.19□□□□□ -1.9
LMO4P61968 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.19□□□□□ -1.9
LMO4P61968 RPL31P2-201ENST00000413849 377 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.19□□□□□ -1.9
LMO4P61968 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.19□□□□□ -1.9
LMO4P61968 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 AC069157.1-201ENST00000421749 137 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AL139247.1-201ENST00000422768 325 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AC092832.1-201ENST00000422934 400 ntBASIC3.19□□□□□ -1.9
LMO4P61968 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.19□□□□□ -1.9
LMO4P61968 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 B3GNT2P1-201ENST00000434960 952 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LMO4P61968 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.19□□□□□ -1.9
LMO4P61968 AL590399.6-201ENST00000446396 307 ntBASIC3.19□□□□□ -1.9
LMO4P61968 NANOGNBP1-201ENST00000448444 480 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.19□□□□□ -1.9
LMO4P61968 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.19□□□□□ -1.9
LMO4P61968 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.19□□□□□ -1.9
LMO4P61968 RPL7P38-201ENST00000488396 739 ntBASIC3.19□□□□□ -1.9
LMO4P61968 UBE2CP3-201ENST00000502715 450 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AC025554.1-201ENST00000505641 188 ntBASIC3.19□□□□□ -1.9
LMO4P61968 STMN1P2-201ENST00000508435 439 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.19□□□□□ -1.9
LMO4P61968 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 AC104057.1-201ENST00000515547 497 ntBASIC3.19□□□□□ -1.9
LMO4P61968 RN7SKP244-201ENST00000516513 307 ntBASIC3.19□□□□□ -1.9
LMO4P61968 RNA5SP164-201ENST00000516533 110 ntBASIC3.19□□□□□ -1.9
LMO4P61968 RNU6-885P-201ENST00000516607 104 ntBASIC3.19□□□□□ -1.9
LMO4P61968 HMGB1P19-201ENST00000517578 577 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AC026403.1-201ENST00000518938 295 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AC008802.1-201ENST00000519121 791 ntBASIC3.19□□□□□ -1.9
LMO4P61968 IGHV3-32-201ENST00000519182 355 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.19□□□□□ -1.9
LMO4P61968 AC022695.1-201ENST00000522089 237 ntBASIC3.19□□□□□ -1.9
LMO4P61968 OR5M7P-201ENST00000526140 972 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.19□□□□□ -1.9
LMO4P61968 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.19□□□□□ -1.9
LMO4P61968 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.19□□□□□ -1.9
LMO4P61968 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 EEF1B2P4-201ENST00000551398 348 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 MIR5187-201ENST00000583479 76 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.19□□□□□ -1.9
LMO4P61968 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.19□□□□□ -1.9
LMO4P61968 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 AC006566.1-201ENST00000608943 513 ntBASIC3.19□□□□□ -1.9
LMO4P61968 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AC138932.5-201ENST00000617759 563 ntBASIC3.19□□□□□ -1.9
LMO4P61968 U73479.1-201ENST00000618062 168 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AC068722.2-201ENST00000618734 544 ntBASIC3.19□□□□□ -1.9
LMO4P61968 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO4P61968 TEX21P-201ENST00000447107 1476 ntBASIC3.19□□□□□ -1.9
LMO4P61968 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
LMO4P61968 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO4P61968 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LMO4P61968 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LMO4P61968 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LMO4P61968 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO4P61968 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO4P61968 PABPC1P7-201ENST00000413177 1513 ntBASIC3.19□□□□□ -1.9
LMO4P61968 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.19□□□□□ -1.9
LMO4P61968 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LMO4P61968 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms