Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PER3P56645 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.47□□□□□ -1.69
PER3P56645 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
PER3P56645 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
PER3P56645 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
PER3P56645 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PER3P56645 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PER3P56645 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.46□□□□□ -1.69
PER3P56645 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.46□□□□□ -1.69
PER3P56645 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PER3P56645 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PER3P56645 NMD3P1-201ENST00000439704 1488 ntBASIC4.46□□□□□ -1.7
PER3P56645 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PER3P56645 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PER3P56645 RNA5SP28-201ENST00000363841 119 ntBASIC4.46□□□□□ -1.7
PER3P56645 RNU6-108P-201ENST00000365558 107 ntBASIC4.46□□□□□ -1.7
PER3P56645 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
PER3P56645 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.46□□□□□ -1.7
PER3P56645 Y_RNA.493-201ENST00000384422 102 ntBASIC4.46□□□□□ -1.7
PER3P56645 MT-TC-201ENST00000387405 66 ntBASIC4.46□□□□□ -1.7
PER3P56645 RNA5SP56-201ENST00000410277 118 ntBASIC4.46□□□□□ -1.7
PER3P56645 ELOCP4-201ENST00000420090 333 ntBASIC4.46□□□□□ -1.7
PER3P56645 CHIAP3-201ENST00000423668 1133 ntBASIC4.46□□□□□ -1.7
PER3P56645 AC005517.2-201ENST00000424673 553 ntBASIC4.46□□□□□ -1.7
PER3P56645 PSMA2P3-201ENST00000429685 675 ntBASIC4.46□□□□□ -1.7
PER3P56645 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PER3P56645 SNRPEP8-201ENST00000442866 260 ntBASIC4.46□□□□□ -1.7
PER3P56645 NANOGP10-201ENST00000453325 895 ntBASIC4.46□□□□□ -1.7
PER3P56645 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.46□□□□□ -1.7
PER3P56645 RN7SL817P-201ENST00000480777 288 ntBASIC4.46□□□□□ -1.7
PER3P56645 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.46□□□□□ -1.7
PER3P56645 AC041039.1-201ENST00000485656 536 ntBASIC4.46□□□□□ -1.7
PER3P56645 RPL36AP51-201ENST00000487216 318 ntBASIC4.46□□□□□ -1.7
PER3P56645 DEFB109F-201ENST00000491870 277 ntBASIC4.46□□□□□ -1.7
PER3P56645 MTCYBP18-201ENST00000501056 747 ntBASIC4.46□□□□□ -1.7
PER3P56645 AC093840.1-201ENST00000511599 336 ntBASIC4.46□□□□□ -1.7
PER3P56645 RNU6-507P-201ENST00000516045 100 ntBASIC4.46□□□□□ -1.7
PER3P56645 SCARNA24.1-201ENST00000516465 137 ntBASIC4.46□□□□□ -1.7
PER3P56645 Y_RNA.702-201ENST00000516843 96 ntBASIC4.46□□□□□ -1.7
PER3P56645 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.46□□□□□ -1.7
PER3P56645 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.46□□□□□ -1.7
PER3P56645 OR4T1P-201ENST00000554933 911 ntBASIC4.46□□□□□ -1.7
PER3P56645 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.46□□□□□ -1.7
PER3P56645 NDUFB4P11-201ENST00000560510 395 ntBASIC4.46□□□□□ -1.7
PER3P56645 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.46□□□□□ -1.7
PER3P56645 AC012417.1-201ENST00000582307 1039 ntBASIC4.46□□□□□ -1.7
PER3P56645 AC060780.3-201ENST00000589464 80 ntBASIC4.46□□□□□ -1.7
PER3P56645 AC073091.2-201ENST00000603205 907 ntBASIC4.46□□□□□ -1.7
PER3P56645 AP003117.2-201ENST00000606010 545 ntBASIC4.46□□□□□ -1.7
PER3P56645 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.46□□□□□ -1.7
PER3P56645 AC245517.5-201ENST00000611529 162 ntBASIC4.46□□□□□ -1.7
PER3P56645 AP005264.7-201ENST00000625003 745 ntBASIC4.46□□□□□ -1.7
PER3P56645 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.46□□□□□ -1.7
PER3P56645 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PER3P56645 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PER3P56645 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PER3P56645 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
PER3P56645 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PER3P56645 OR14L1P-202ENST00000641545 3009 ntBASIC4.46□□□□□ -1.7
PER3P56645 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 AC009951.1-201ENST00000623674 2614 ntBASIC4.45□□□□□ -1.7
PER3P56645 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PER3P56645 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PER3P56645 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PER3P56645 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PER3P56645 RNU6-1322P-201ENST00000364309 107 ntBASIC4.45□□□□□ -1.7
PER3P56645 RNY3P13-201ENST00000365542 102 ntBASIC4.45□□□□□ -1.7
PER3P56645 Y_RNA.481-201ENST00000384373 102 ntBASIC4.45□□□□□ -1.7
PER3P56645 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PER3P56645 RNU6-876P-201ENST00000391295 104 ntBASIC4.45□□□□□ -1.7
PER3P56645 RNU2-47P-201ENST00000410649 186 ntBASIC4.45□□□□□ -1.7
PER3P56645 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 NRBF2P3-201ENST00000432731 865 ntBASIC4.45□□□□□ -1.7
PER3P56645 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.45□□□□□ -1.7
PER3P56645 TPT1P14-201ENST00000448018 505 ntBASIC4.45□□□□□ -1.7
PER3P56645 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.45□□□□□ -1.7
PER3P56645 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.45□□□□□ -1.7
PER3P56645 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 TMEM248P1-201ENST00000510579 951 ntBASIC4.45□□□□□ -1.7
PER3P56645 FTH1P21-201ENST00000512179 511 ntBASIC4.45□□□□□ -1.7
PER3P56645 RN7SKP122-201ENST00000515923 296 ntBASIC4.45□□□□□ -1.7
PER3P56645 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.45□□□□□ -1.7
PER3P56645 AP001646.1-201ENST00000527936 915 ntBASIC4.45□□□□□ -1.7
PER3P56645 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.45□□□□□ -1.7
PER3P56645 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 AL359212.1-201ENST00000556608 614 ntBASIC4.45□□□□□ -1.7
PER3P56645 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.45□□□□□ -1.7
PER3P56645 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.45□□□□□ -1.7
PER3P56645 AC005730.3-201ENST00000583067 366 ntBASIC4.45□□□□□ -1.7
PER3P56645 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.45□□□□□ -1.7
PER3P56645 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.45□□□□□ -1.7
PER3P56645 AL359314.1-201ENST00000616913 261 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms