Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIMK2P53671 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.5□□□□□ -1.85
LIMK2P53671 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIMK2P53671 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.5□□□□□ -1.85
LIMK2P53671 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIMK2P53671 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.5□□□□□ -1.85
LIMK2P53671 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK2P53671 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK2P53671 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.49□□□□□ -1.85
LIMK2P53671 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK2P53671 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK2P53671 RNU6-339P-201ENST00000384310 107 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK2P53671 AC017079.2-201ENST00000416102 485 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 USP9YP11-201ENST00000427537 717 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.49□□□□□ -1.85
LIMK2P53671 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
LIMK2P53671 BX679664.1-201ENST00000434429 253 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK2P53671 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.49□□□□□ -1.85
LIMK2P53671 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.49□□□□□ -1.85
LIMK2P53671 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK2P53671 NPM1P49-201ENST00000448027 714 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK2P53671 HMGN2P7-201ENST00000456186 273 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AC013828.1-201ENST00000481845 158 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.49□□□□□ -1.85
LIMK2P53671 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK2P53671 MTCYBP16-201ENST00000509187 1129 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK2P53671 MTCO3P44-201ENST00000510977 541 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AC087808.1-201ENST00000520501 361 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK2P53671 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.49□□□□□ -1.85
LIMK2P53671 AP003385.6-201ENST00000531603 374 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AP004242.1-201ENST00000533701 349 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AL389895.1-201ENST00000554127 252 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.49□□□□□ -1.85
LIMK2P53671 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK2P53671 VN1R83P-201ENST00000595685 445 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AL355812.1-201ENST00000603215 216 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AC080013.6-201ENST00000606185 215 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AC064807.4-201ENST00000607201 407 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AC024257.5-201ENST00000612739 531 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AC090116.1-201ENST00000615679 446 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
LIMK2P53671 MKKS-204ENST00000639674 192 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
LIMK2P53671 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK2P53671 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.49□□□□□ -1.85
LIMK2P53671 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK2P53671 AL513302.2-201ENST00000562313 1842 ntBASIC3.49□□□□□ -1.85
LIMK2P53671 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK2P53671 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK2P53671 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LIMK2P53671 OTUD4P1-201ENST00000237841 3067 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIMK2P53671 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.48□□□□□ -1.85
LIMK2P53671 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LIMK2P53671 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.48□□□□□ -1.85
LIMK2P53671 OR5H2-201ENST00000355273 945 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LIMK2P53671 FRG1CP-201ENST00000358464 769 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 RNVU1-3-201ENST00000364313 161 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 RNU6-335P-201ENST00000364563 113 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 SNORD6-201ENST00000365444 73 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 RNU6-730P-201ENST00000383954 104 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 MIR490-201ENST00000384865 128 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 MIR491-201ENST00000384877 84 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 MIR483-201ENST00000385070 76 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 RNU6-328P-201ENST00000390887 106 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 RPL17P50-201ENST00000396131 546 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 RPL23AP47-201ENST00000408017 460 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 RNA5SP56-201ENST00000410277 118 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.48□□□□□ -1.85
LIMK2P53671 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.48□□□□□ -1.85
LIMK2P53671 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.48□□□□□ -1.85
LIMK2P53671 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIMK2P53671 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.48□□□□□ -1.85
LIMK2P53671 AL513174.1-201ENST00000423182 629 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.48□□□□□ -1.85
LIMK2P53671 AC097713.2-201ENST00000430199 356 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.48□□□□□ -1.85
LIMK2P53671 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.48□□□□□ -1.85
LIMK2P53671 RBMY2UP-201ENST00000453474 324 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 snoU13.24-201ENST00000458998 104 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.48□□□□□ -1.85
LIMK2P53671 AC087312.1-201ENST00000471411 480 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 SYPL1P1-201ENST00000473622 768 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 AC092451.1-201ENST00000480211 153 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 MTND2P14-201ENST00000482139 351 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 RPL31P13-201ENST00000484151 370 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.48□□□□□ -1.85
LIMK2P53671 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.48□□□□□ -1.85
LIMK2P53671 AC010486.3-201ENST00000511602 785 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 AC118465.1-201ENST00000513820 1271 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 Y_RNA.688-201ENST00000516565 95 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 SNORA70.18-201ENST00000516696 98 ntBASIC3.48□□□□□ -1.85
LIMK2P53671 MIR2276-201ENST00000516886 89 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms