Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.33□□□□□ -1.72
COPB1P53618 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.33□□□□□ -1.72
COPB1P53618 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.33□□□□□ -1.72
COPB1P53618 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.33□□□□□ -1.72
COPB1P53618 AP001180.3-201ENST00000582221 145 ntBASIC4.33□□□□□ -1.72
COPB1P53618 AC011477.5-201ENST00000586571 259 ntBASIC4.33□□□□□ -1.72
COPB1P53618 BNIP3P23-201ENST00000599655 511 ntBASIC4.33□□□□□ -1.72
COPB1P53618 ARF4P1-201ENST00000605447 541 ntBASIC4.33□□□□□ -1.72
COPB1P53618 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.33□□□□□ -1.72
COPB1P53618 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COPB1P53618 MIR8059-201ENST00000620427 81 ntBASIC4.33□□□□□ -1.72
COPB1P53618 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.33□□□□□ -1.72
COPB1P53618 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.33□□□□□ -1.72
COPB1P53618 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPB1P53618 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.32□□□□□ -1.72
COPB1P53618 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.32□□□□□ -1.72
COPB1P53618 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
COPB1P53618 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPB1P53618 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.32□□□□□ -1.72
COPB1P53618 OR11H5P-202ENST00000641612 1325 ntBASIC4.32□□□□□ -1.72
COPB1P53618 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPB1P53618 AC011155.1-201ENST00000316512 456 ntBASIC4.32□□□□□ -1.72
COPB1P53618 SNORA40.3-201ENST00000390964 122 ntBASIC4.32□□□□□ -1.72
COPB1P53618 EIF5P1-201ENST00000400019 1231 ntBASIC4.32□□□□□ -1.72
COPB1P53618 MIR1305-201ENST00000408300 86 ntBASIC4.32□□□□□ -1.72
COPB1P53618 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.32□□□□□ -1.72
COPB1P53618 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.32□□□□□ -1.72
COPB1P53618 EIF1P1-201ENST00000421436 341 ntBASIC4.32□□□□□ -1.72
COPB1P53618 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.32□□□□□ -1.72
COPB1P53618 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.32□□□□□ -1.72
COPB1P53618 OR8F1P-201ENST00000425243 930 ntBASIC4.32□□□□□ -1.72
COPB1P53618 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COPB1P53618 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.32□□□□□ -1.72
COPB1P53618 AC023347.2-201ENST00000433994 462 ntBASIC4.32□□□□□ -1.72
COPB1P53618 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.32□□□□□ -1.72
COPB1P53618 AC244505.5-201ENST00000443639 207 ntBASIC4.32□□□□□ -1.72
COPB1P53618 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.32□□□□□ -1.72
COPB1P53618 PDSS1P2-201ENST00000449397 678 ntBASIC4.32□□□□□ -1.72
COPB1P53618 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.32□□□□□ -1.72
COPB1P53618 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.32□□□□□ -1.72
COPB1P53618 RN7SL93P-201ENST00000463035 293 ntBASIC4.32□□□□□ -1.72
COPB1P53618 UQCRHP4-201ENST00000471686 272 ntBASIC4.32□□□□□ -1.72
COPB1P53618 AC126182.1-201ENST00000478134 357 ntBASIC4.32□□□□□ -1.72
COPB1P53618 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.32□□□□□ -1.72
COPB1P53618 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.32□□□□□ -1.72
COPB1P53618 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.32□□□□□ -1.72
COPB1P53618 AF131216.2-201ENST00000512316 564 ntBASIC4.32□□□□□ -1.72
COPB1P53618 AC026402.1-201ENST00000513642 170 ntBASIC4.32□□□□□ -1.72
COPB1P53618 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.32□□□□□ -1.72
COPB1P53618 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.32□□□□□ -1.72
COPB1P53618 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.32□□□□□ -1.72
COPB1P53618 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.32□□□□□ -1.72
COPB1P53618 AGGF1P8-201ENST00000562979 1000 ntBASIC4.32□□□□□ -1.72
COPB1P53618 RN7SL600P-201ENST00000581811 299 ntBASIC4.32□□□□□ -1.72
COPB1P53618 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.32□□□□□ -1.72
COPB1P53618 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.32□□□□□ -1.72
COPB1P53618 NF1P5-201ENST00000588287 448 ntBASIC4.32□□□□□ -1.72
COPB1P53618 BNIP3P33-201ENST00000598912 569 ntBASIC4.32□□□□□ -1.72
COPB1P53618 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.32□□□□□ -1.72
COPB1P53618 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.32□□□□□ -1.72
COPB1P53618 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.32□□□□□ -1.72
COPB1P53618 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.32□□□□□ -1.72
COPB1P53618 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.32□□□□□ -1.72
COPB1P53618 PNPT1P2-201ENST00000456768 2050 ntBASIC4.32□□□□□ -1.72
COPB1P53618 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPB1P53618 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COPB1P53618 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COPB1P53618 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COPB1P53618 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.31□□□□□ -1.72
COPB1P53618 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
COPB1P53618 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.31□□□□□ -1.72
COPB1P53618 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
COPB1P53618 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COPB1P53618 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.31□□□□□ -1.72
COPB1P53618 DCAF13P1-201ENST00000495256 1330 ntBASIC4.31□□□□□ -1.72
COPB1P53618 RNU1-18P-201ENST00000363062 164 ntBASIC4.31□□□□□ -1.72
COPB1P53618 RNU1-64P-201ENST00000365443 163 ntBASIC4.31□□□□□ -1.72
COPB1P53618 RNU6-769P-201ENST00000384407 104 ntBASIC4.31□□□□□ -1.72
COPB1P53618 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.31□□□□□ -1.72
COPB1P53618 Y_RNA.598-201ENST00000410480 95 ntBASIC4.31□□□□□ -1.72
COPB1P53618 MTND1P21-201ENST00000412991 285 ntBASIC4.31□□□□□ -1.72
COPB1P53618 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.31□□□□□ -1.72
COPB1P53618 USP9YP13-201ENST00000417797 480 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AIMP1P1-201ENST00000418670 937 ntBASIC4.31□□□□□ -1.72
COPB1P53618 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.31□□□□□ -1.72
COPB1P53618 RPL23AP38-201ENST00000423801 469 ntBASIC4.31□□□□□ -1.72
COPB1P53618 RWDD4P2-201ENST00000426392 563 ntBASIC4.31□□□□□ -1.72
COPB1P53618 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.31□□□□□ -1.72
COPB1P53618 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.31□□□□□ -1.72
COPB1P53618 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.31□□□□□ -1.72
COPB1P53618 PGBD4P3-201ENST00000440731 581 ntBASIC4.31□□□□□ -1.72
COPB1P53618 RANP8-201ENST00000444720 713 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.31□□□□□ -1.72
COPB1P53618 AC114755.5-201ENST00000447760 831 ntBASIC4.31□□□□□ -1.72
COPB1P53618 USP9YP12-201ENST00000450481 570 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AL033528.1-201ENST00000453780 140 ntBASIC4.31□□□□□ -1.72
COPB1P53618 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.31□□□□□ -1.72
COPB1P53618 KLF3P2-201ENST00000465138 268 ntBASIC4.31□□□□□ -1.72
COPB1P53618 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
COPB1P53618 TMED11P-201ENST00000479478 690 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms