Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RNU6-921P-201ENST00000384361 107 ntBASIC3.21□□□□□ -1.9
ACLYP53396 RPL23AP47-201ENST00000408017 460 ntBASIC3.21□□□□□ -1.9
ACLYP53396 RNU4-78P-201ENST00000410940 126 ntBASIC3.21□□□□□ -1.9
ACLYP53396 RNA5SP107-201ENST00000411358 122 ntBASIC3.21□□□□□ -1.9
ACLYP53396 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.21□□□□□ -1.9
ACLYP53396 AC009237.2-201ENST00000421358 284 ntBASIC3.21□□□□□ -1.9
ACLYP53396 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ACLYP53396 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ACLYP53396 ISCA1P2-201ENST00000438679 421 ntBASIC3.21□□□□□ -1.9
ACLYP53396 HSFY3P-201ENST00000444242 1191 ntBASIC3.21□□□□□ -1.9
ACLYP53396 RPL7P36-201ENST00000444633 681 ntBASIC3.21□□□□□ -1.9
ACLYP53396 AC125238.1-201ENST00000448842 249 ntBASIC3.21□□□□□ -1.9
ACLYP53396 NIPA2P5-201ENST00000452282 464 ntBASIC3.21□□□□□ -1.9
ACLYP53396 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.21□□□□□ -1.9
ACLYP53396 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.21□□□□□ -1.9
ACLYP53396 RPS4XP6-201ENST00000477670 797 ntBASIC3.21□□□□□ -1.9
ACLYP53396 TRBV12-1-201ENST00000479785 344 ntBASIC3.21□□□□□ -1.9
ACLYP53396 AC025768.1-201ENST00000510057 267 ntBASIC3.21□□□□□ -1.9
ACLYP53396 RNU4-29P-201ENST00000515943 174 ntBASIC3.21□□□□□ -1.9
ACLYP53396 HMGB1P1-201ENST00000522557 636 ntBASIC3.21□□□□□ -1.9
ACLYP53396 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
ACLYP53396 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.21□□□□□ -1.9
ACLYP53396 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
ACLYP53396 AC009097.3-201ENST00000563557 1018 ntBASIC3.21□□□□□ -1.9
ACLYP53396 AC012182.1-201ENST00000570133 895 ntBASIC3.21□□□□□ -1.9
ACLYP53396 AC074051.3-201ENST00000570238 358 ntBASIC3.21□□□□□ -1.9
ACLYP53396 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.21□□□□□ -1.9
ACLYP53396 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.21□□□□□ -1.9
ACLYP53396 AC068722.2-201ENST00000618734 544 ntBASIC3.21□□□□□ -1.9
ACLYP53396 PLCE1P1-201ENST00000622094 305 ntBASIC3.21□□□□□ -1.9
ACLYP53396 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.21□□□□□ -1.9
ACLYP53396 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
ACLYP53396 MTND5P24-201ENST00000438892 1767 ntBASIC3.2□□□□□ -1.9
ACLYP53396 RNA5SP295-201ENST00000362655 121 ntBASIC3.2□□□□□ -1.9
ACLYP53396 RPL31P1-201ENST00000398116 372 ntBASIC3.2□□□□□ -1.9
ACLYP53396 OR51A3P-201ENST00000413596 924 ntBASIC3.2□□□□□ -1.9
ACLYP53396 RPS7P13-201ENST00000413955 498 ntBASIC3.2□□□□□ -1.9
ACLYP53396 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.2□□□□□ -1.9
ACLYP53396 RPS7P2-201ENST00000435134 607 ntBASIC3.2□□□□□ -1.9
ACLYP53396 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.2□□□□□ -1.9
ACLYP53396 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.2□□□□□ -1.9
ACLYP53396 GTF2IP12-201ENST00000456547 356 ntBASIC3.2□□□□□ -1.9
ACLYP53396 AC092754.2-201ENST00000463506 460 ntBASIC3.2□□□□□ -1.9
ACLYP53396 ST13P14-201ENST00000474095 734 ntBASIC3.2□□□□□ -1.9
ACLYP53396 AL024509.2-201ENST00000493462 493 ntBASIC3.2□□□□□ -1.9
ACLYP53396 PRELID3BP4-201ENST00000515476 571 ntBASIC3.2□□□□□ -1.9
ACLYP53396 SNORA31.20-201ENST00000517111 133 ntBASIC3.2□□□□□ -1.9
ACLYP53396 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.2□□□□□ -1.9
ACLYP53396 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.2□□□□□ -1.9
ACLYP53396 HIGD1AP10-201ENST00000527837 282 ntBASIC3.2□□□□□ -1.9
ACLYP53396 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.2□□□□□ -1.9
ACLYP53396 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.2□□□□□ -1.9
ACLYP53396 SNRPGP1-201ENST00000553864 222 ntBASIC3.2□□□□□ -1.9
ACLYP53396 BPTFP1-201ENST00000579209 492 ntBASIC3.2□□□□□ -1.9
ACLYP53396 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ACLYP53396 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.2□□□□□ -1.9
ACLYP53396 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.2□□□□□ -1.9
ACLYP53396 AL118556.2-201ENST00000614375 824 ntBASIC3.2□□□□□ -1.9
ACLYP53396 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
ACLYP53396 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.2□□□□□ -1.9
ACLYP53396 AC097460.3-201ENST00000623099 442 ntBASIC3.2□□□□□ -1.9
ACLYP53396 AC243829.7-201ENST00000633081 225 ntBASIC3.2□□□□□ -1.9
ACLYP53396 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.2□□□□□ -1.9
ACLYP53396 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
ACLYP53396 AC138915.3-201ENST00000562908 1389 ntBASIC3.2□□□□□ -1.9
ACLYP53396 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ACLYP53396 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.2□□□□□ -1.9
ACLYP53396 AC091152.2-201ENST00000591628 2569 ntBASIC3.19□□□□□ -1.9
ACLYP53396 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
ACLYP53396 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ACLYP53396 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ACLYP53396 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ACLYP53396 U3.12-201ENST00000364498 214 ntBASIC3.19□□□□□ -1.9
ACLYP53396 MIR649-201ENST00000384843 97 ntBASIC3.19□□□□□ -1.9
ACLYP53396 MIR34A-201ENST00000385130 110 ntBASIC3.19□□□□□ -1.9
ACLYP53396 SNORD65C-201ENST00000390962 71 ntBASIC3.19□□□□□ -1.9
ACLYP53396 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ACLYP53396 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ACLYP53396 AC245291.1-201ENST00000419501 328 ntBASIC3.19□□□□□ -1.9
ACLYP53396 GLRXP1-201ENST00000423261 334 ntBASIC3.19□□□□□ -1.9
ACLYP53396 MTND4P15-201ENST00000437913 1033 ntBASIC3.19□□□□□ -1.9
ACLYP53396 AC002542.1-201ENST00000440683 193 ntBASIC3.19□□□□□ -1.9
ACLYP53396 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.19□□□□□ -1.9
ACLYP53396 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.19□□□□□ -1.9
ACLYP53396 AL162389.1-201ENST00000449233 177 ntBASIC3.19□□□□□ -1.9
ACLYP53396 AC104073.1-201ENST00000451988 151 ntBASIC3.19□□□□□ -1.9
ACLYP53396 NECAP1P2-201ENST00000455668 727 ntBASIC3.19□□□□□ -1.9
ACLYP53396 RN7SL330P-201ENST00000469709 307 ntBASIC3.19□□□□□ -1.9
ACLYP53396 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.19□□□□□ -1.9
ACLYP53396 MTND3P24-201ENST00000506306 329 ntBASIC3.19□□□□□ -1.9
ACLYP53396 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.19□□□□□ -1.9
ACLYP53396 RNU1-143P-201ENST00000516296 146 ntBASIC3.19□□□□□ -1.9
ACLYP53396 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.19□□□□□ -1.9
ACLYP53396 AC079148.1-201ENST00000565944 819 ntBASIC3.19□□□□□ -1.9
ACLYP53396 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.19□□□□□ -1.9
ACLYP53396 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.19□□□□□ -1.9
ACLYP53396 AL020997.3-201ENST00000602843 359 ntBASIC3.19□□□□□ -1.9
ACLYP53396 U1.23-201ENST00000610293 146 ntBASIC3.19□□□□□ -1.9
ACLYP53396 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ACLYP53396 RNU1-68P-201ENST00000615382 146 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms