Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CSNK1A1P48729 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSNK1A1P48729 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AL049780.3-201ENST00000624612 1583 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC111188.2-201ENST00000529697 1387 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC007899.1-201ENST00000412776 775 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 AL353678.1-201ENST00000422735 741 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 MTATP6P4-201ENST00000427725 675 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC092634.2-201ENST00000428146 1010 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 MTCYBP15-201ENST00000433123 1127 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC091862.1-201ENST00000438016 1100 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 RABEPKP1-201ENST00000440529 1026 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC140076.1-201ENST00000449897 361 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 BTF3P5-201ENST00000457252 467 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 RN7SL863P-201ENST00000462370 296 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC104629.1-201ENST00000494226 508 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC096751.1-202ENST00000502691 1067 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 HSPD1P15-201ENST00000505573 1122 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC048346.1-201ENST00000510247 144 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC074250.1-201ENST00000511117 192 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC239860.2-201ENST00000525886 270 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC090079.2-201ENST00000575289 768 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 MIR5680-201ENST00000577577 84 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 MIR4666A-201ENST00000580160 79 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 SNORD39.3-201ENST00000584451 71 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC008507.2-201ENST00000588402 1176 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC008962.1-201ENST00000605729 304 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 MIR92B-201ENST00000607575 96 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 AC095031.1-201ENST00000623685 672 ntBASIC2.8□□□□□ -1.96
CSNK1A1P48729 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.8□□□□□ -1.96
CSNK1A1P48729 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSNK1A1P48729 MTND5P7-201ENST00000413558 1798 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.79□□□□□ -1.96
CSNK1A1P48729 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.79□□□□□ -1.96
CSNK1A1P48729 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSNK1A1P48729 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSNK1A1P48729 RNU6-582P-201ENST00000362989 107 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 RNVU1-14-201ENST00000384770 164 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 MIR34B-201ENST00000385076 84 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 AL603865.2-201ENST00000401679 213 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 TMSB4XP8-201ENST00000402089 135 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.79□□□□□ -1.96
CSNK1A1P48729 RNU4-47P-201ENST00000410876 114 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 AL024507.1-201ENST00000412741 274 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 TMSB4XP6-201ENST00000415187 135 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.79□□□□□ -1.96
CSNK1A1P48729 TMSB4XP1-201ENST00000424567 135 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.79□□□□□ -1.96
CSNK1A1P48729 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.79□□□□□ -1.96
CSNK1A1P48729 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.79□□□□□ -1.96
CSNK1A1P48729 AC108734.1-201ENST00000439549 399 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 AL591503.2-201ENST00000442314 1005 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 Z75741.1-201ENST00000446793 314 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 AL049829.1-201ENST00000465411 156 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 RPL7P49-201ENST00000471402 708 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 RPS26P21-201ENST00000475397 348 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 RN7SL283P-201ENST00000489055 303 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSNK1A1P48729 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.79□□□□□ -1.96
CSNK1A1P48729 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSNK1A1P48729 SNORA31.8-201ENST00000516327 108 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 RNU6-885P-201ENST00000516607 104 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 SNORA31.26-201ENST00000517250 137 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.79□□□□□ -1.96
CSNK1A1P48729 ERHP1-201ENST00000523006 310 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.79□□□□□ -1.96
CSNK1A1P48729 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.79□□□□□ -1.96
CSNK1A1P48729 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.79□□□□□ -1.96
CSNK1A1P48729 COX6CP3-201ENST00000580869 223 ntBASIC2.79□□□□□ -1.96
CSNK1A1P48729 AC090330.1-201ENST00000588646 764 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms