Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AP003355.1-201ENST00000518956 587 ntBASIC2.96□□□□□ -1.94
RFX3P48380 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 ARL2BPP5-201ENST00000523141 481 ntBASIC2.96□□□□□ -1.94
RFX3P48380 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
RFX3P48380 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFX3P48380 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 AC092451.2-201ENST00000538746 658 ntBASIC2.96□□□□□ -1.94
RFX3P48380 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.96□□□□□ -1.94
RFX3P48380 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.96□□□□□ -1.94
RFX3P48380 CKS1BP3-201ENST00000600888 237 ntBASIC2.96□□□□□ -1.94
RFX3P48380 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 AL591516.1-201ENST00000611326 274 ntBASIC2.96□□□□□ -1.94
RFX3P48380 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
RFX3P48380 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.96□□□□□ -1.94
RFX3P48380 NUP58P1-201ENST00000502546 1738 ntBASIC2.96□□□□□ -1.94
RFX3P48380 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RFX3P48380 AC093831.2-201ENST00000624393 3427 ntBASIC2.95□□□□□ -1.94
RFX3P48380 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.95□□□□□ -1.94
RFX3P48380 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
RFX3P48380 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RFX3P48380 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RFX3P48380 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX3P48380 U3.19-201ENST00000390893 196 ntBASIC2.95□□□□□ -1.94
RFX3P48380 RNU1-101P-201ENST00000391171 127 ntBASIC2.95□□□□□ -1.94
RFX3P48380 AL133384.1-201ENST00000412744 351 ntBASIC2.95□□□□□ -1.94
RFX3P48380 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.95□□□□□ -1.94
RFX3P48380 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX3P48380 HSPE1P1-201ENST00000421494 318 ntBASIC2.95□□□□□ -1.94
RFX3P48380 AL158156.1-201ENST00000422509 473 ntBASIC2.95□□□□□ -1.94
RFX3P48380 AC233728.2-201ENST00000425348 757 ntBASIC2.95□□□□□ -1.94
RFX3P48380 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX3P48380 FO393414.1-201ENST00000428697 1184 ntBASIC2.95□□□□□ -1.94
RFX3P48380 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX3P48380 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.95□□□□□ -1.94
RFX3P48380 MTND2P19-201ENST00000449129 1012 ntBASIC2.95□□□□□ -1.94
RFX3P48380 AC104978.1-201ENST00000449387 391 ntBASIC2.95□□□□□ -1.94
RFX3P48380 AL445669.2-201ENST00000454425 421 ntBASIC2.95□□□□□ -1.94
RFX3P48380 RPL21P18-201ENST00000469899 480 ntBASIC2.95□□□□□ -1.94
RFX3P48380 RPL7P5-201ENST00000471472 736 ntBASIC2.95□□□□□ -1.94
RFX3P48380 GAPDHP39-201ENST00000481866 979 ntBASIC2.95□□□□□ -1.94
RFX3P48380 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.95□□□□□ -1.94
RFX3P48380 DSTNP2-201ENST00000504533 515 ntBASIC2.95□□□□□ -1.94
RFX3P48380 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX3P48380 KLHL2P1-201ENST00000508691 521 ntBASIC2.95□□□□□ -1.94
RFX3P48380 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX3P48380 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.95□□□□□ -1.94
RFX3P48380 AP001207.2-201ENST00000519490 539 ntBASIC2.95□□□□□ -1.94
RFX3P48380 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.95□□□□□ -1.94
RFX3P48380 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX3P48380 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX3P48380 OR4H12P-201ENST00000556269 907 ntBASIC2.95□□□□□ -1.94
RFX3P48380 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX3P48380 MIR5195-201ENST00000583555 115 ntBASIC2.95□□□□□ -1.94
RFX3P48380 SNORD84-203ENST00000584275 78 ntBASIC2.95□□□□□ -1.94
RFX3P48380 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.95□□□□□ -1.94
RFX3P48380 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX3P48380 PRELID3BP8-201ENST00000604148 295 ntBASIC2.95□□□□□ -1.94
RFX3P48380 AC008962.1-201ENST00000605729 304 ntBASIC2.95□□□□□ -1.94
RFX3P48380 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.95□□□□□ -1.94
RFX3P48380 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX3P48380 AC090897.3-201ENST00000636973 1157 ntBASIC2.95□□□□□ -1.94
RFX3P48380 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.95□□□□□ -1.94
RFX3P48380 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.95□□□□□ -1.94
RFX3P48380 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
RFX3P48380 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RFX3P48380 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.95□□□□□ -1.94
RFX3P48380 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RFX3P48380 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RFX3P48380 MAPK10-322ENST00000641485 4530 ntBASIC2.94□□□□□ -1.94
RFX3P48380 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.94□□□□□ -1.94
RFX3P48380 OR1S2-201ENST00000302592 978 ntBASIC2.94□□□□□ -1.94
RFX3P48380 RNU6-525P-201ENST00000363685 104 ntBASIC2.94□□□□□ -1.94
RFX3P48380 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.94□□□□□ -1.94
RFX3P48380 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
RFX3P48380 SNORA51.6-201ENST00000384151 125 ntBASIC2.94□□□□□ -1.94
RFX3P48380 U3.42-201ENST00000408746 214 ntBASIC2.94□□□□□ -1.94
RFX3P48380 AL136133.1-201ENST00000413694 376 ntBASIC2.94□□□□□ -1.94
RFX3P48380 AL353678.1-201ENST00000422735 741 ntBASIC2.94□□□□□ -1.94
RFX3P48380 RPL7P46-201ENST00000425129 740 ntBASIC2.94□□□□□ -1.94
RFX3P48380 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RFX3P48380 AC005326.1-201ENST00000429197 123 ntBASIC2.94□□□□□ -1.94
RFX3P48380 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
RFX3P48380 AL591503.2-201ENST00000442314 1005 ntBASIC2.94□□□□□ -1.94
RFX3P48380 HSPE1P28-201ENST00000443139 211 ntBASIC2.94□□□□□ -1.94
RFX3P48380 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.94□□□□□ -1.94
RFX3P48380 AC091179.1-201ENST00000461606 579 ntBASIC2.94□□□□□ -1.94
RFX3P48380 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.94□□□□□ -1.94
RFX3P48380 RN7SL807P-201ENST00000470923 297 ntBASIC2.94□□□□□ -1.94
RFX3P48380 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.94□□□□□ -1.94
RFX3P48380 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.94□□□□□ -1.94
RFX3P48380 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.94□□□□□ -1.94
RFX3P48380 AC091860.1-201ENST00000505723 432 ntBASIC2.94□□□□□ -1.94
RFX3P48380 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RFX3P48380 MTCO3P27-201ENST00000514397 196 ntBASIC2.94□□□□□ -1.94
RFX3P48380 RNU6-27P-201ENST00000516146 107 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms