Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC010625.1-201ENST00000511296 403 ntBASIC3.39□□□□□ -1.87
TNFRSF4P43489 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 AC004024.1-201ENST00000549244 247 ntBASIC3.39□□□□□ -1.87
TNFRSF4P43489 HIGD1AP1-201ENST00000550979 275 ntBASIC3.39□□□□□ -1.87
TNFRSF4P43489 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 ZNF192P1-203ENST00000565888 810 ntBASIC3.39□□□□□ -1.87
TNFRSF4P43489 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 SNORD84-203ENST00000584275 78 ntBASIC3.39□□□□□ -1.87
TNFRSF4P43489 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 AL162713.1-201ENST00000604480 262 ntBASIC3.39□□□□□ -1.87
TNFRSF4P43489 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 AC106052.1-201ENST00000608029 497 ntBASIC3.39□□□□□ -1.87
TNFRSF4P43489 AC009974.1-201ENST00000608881 455 ntBASIC3.39□□□□□ -1.87
TNFRSF4P43489 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 AC092650.2-201ENST00000619984 902 ntBASIC3.39□□□□□ -1.87
TNFRSF4P43489 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.39□□□□□ -1.87
TNFRSF4P43489 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFRSF4P43489 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFRSF4P43489 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFRSF4P43489 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TNFRSF4P43489 SNRPEP3-201ENST00000338402 276 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 RNA5SP197-201ENST00000363357 119 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 RNU6-906P-201ENST00000384700 70 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AL136310.1-201ENST00000404926 654 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 RNU6-712P-201ENST00000410558 100 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 Z99755.1-201ENST00000414048 380 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 RPS3AP37-201ENST00000419176 745 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 GLRXP1-201ENST00000423261 334 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 HMGB1P12-201ENST00000438594 598 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AF228730.2-201ENST00000438784 848 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 EEF1A1P39-201ENST00000440791 250 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC007327.1-201ENST00000447461 264 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AL589880.1-201ENST00000448271 287 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC097262.1-201ENST00000452559 548 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 RPL27AP5-201ENST00000469428 449 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC087312.1-201ENST00000471411 480 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC011979.1-201ENST00000472300 483 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TNFRSF4P43489 MTCO3P35-201ENST00000485582 781 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 RPL7P23-201ENST00000493874 747 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC006390.1-201ENST00000508068 283 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 NDUFB4P9-201ENST00000511646 388 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 RN7SKP31-201ENST00000516354 278 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 SLC2A13P1-201ENST00000531560 322 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC005832.3-201ENST00000537929 631 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC126177.3-201ENST00000551839 688 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 HIGD1AP17-201ENST00000554576 276 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AADACP1-206ENST00000561502 1193 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC025946.2-201ENST00000603398 234 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC063944.3-201ENST00000609969 533 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC012531.5-201ENST00000611375 151 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC022149.2-201ENST00000621061 203 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AC091925.2-201ENST00000625059 256 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AL353743.1-202ENST00000431724 1695 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFRSF4P43489 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFRSF4P43489 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFRSF4P43489 AF127577.6-201ENST00000623352 2191 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AP001486.2-201ENST00000561652 5113 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 AL049780.3-201ENST00000624612 1583 ntBASIC3.38□□□□□ -1.87
TNFRSF4P43489 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFRSF4P43489 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TNFRSF4P43489 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFRSF4P43489 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TNFRSF4P43489 UBA52P6-201ENST00000399822 382 ntBASIC3.37□□□□□ -1.87
TNFRSF4P43489 AL590084.1-201ENST00000407885 387 ntBASIC3.37□□□□□ -1.87
TNFRSF4P43489 AL450338.1-201ENST00000407987 512 ntBASIC3.37□□□□□ -1.87
TNFRSF4P43489 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFRSF4P43489 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFRSF4P43489 NANOGP2-201ENST00000435391 727 ntBASIC3.37□□□□□ -1.87
TNFRSF4P43489 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFRSF4P43489 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFRSF4P43489 ATP5C1P1-201ENST00000441945 895 ntBASIC3.37□□□□□ -1.87
TNFRSF4P43489 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFRSF4P43489 AL671855.1-201ENST00000446875 1203 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms