Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN9P43378 AL590233.1-201ENST00000430017 456 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN9P43378 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN9P43378 RPL23AP33-201ENST00000442301 452 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN9P43378 AC002381.1-201ENST00000447049 280 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN9P43378 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN9P43378 AC017015.1-201ENST00000477387 286 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN9P43378 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN9P43378 AC068305.1-201ENST00000497406 726 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.04□□□□□ -1.76
PTPN9P43378 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN9P43378 AC010625.1-201ENST00000511296 403 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN9P43378 Y_RNA.655-201ENST00000515919 96 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN9P43378 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PTPN9P43378 AP000873.5-201ENST00000533906 236 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN9P43378 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN9P43378 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN9P43378 AL360157.1-201ENST00000565962 87 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN9P43378 BBIP1P1-201ENST00000602999 279 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 U73023.1-201ENST00000603134 700 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 AC020910.2-201ENST00000603635 610 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 AC068276.1-201ENST00000605793 379 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 RN7SKP299-201ENST00000606679 301 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 AC097468.3-201ENST00000607956 456 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN9P43378 AC122108.2-201ENST00000611946 526 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 HULC.1-201ENST00000612720 240 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.04□□□□□ -1.76
PTPN9P43378 AL596245.1-201ENST00000618994 362 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 AC025048.6-202ENST00000627667 438 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.04□□□□□ -1.76
PTPN9P43378 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN9P43378 AC090337.1-201ENST00000579651 2074 ntBASIC4.04□□□□□ -1.76
PTPN9P43378 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPN9P43378 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPN9P43378 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTPN9P43378 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN9P43378 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPN9P43378 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN9P43378 FAM35DP-201ENST00000323387 2712 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN9P43378 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPN9P43378 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN9P43378 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTPN9P43378 AL161781.1-201ENST00000354277 403 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN9P43378 RNY4P24-201ENST00000362735 96 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 Y_RNA.97-201ENST00000363094 102 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 RNU6-343P-201ENST00000364709 104 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 Y_RNA.553-201ENST00000384670 102 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 U3.29-201ENST00000391296 212 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 AC025750.1-201ENST00000399891 379 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 HLFP1-201ENST00000402375 499 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 RPS7P13-201ENST00000413955 498 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 RPS12P23-201ENST00000419579 400 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN9P43378 AC005517.2-201ENST00000424673 553 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 PSMA6P3-201ENST00000428242 164 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 AC109583.1-201ENST00000432156 268 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 RPL37P21-201ENST00000435890 276 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 Z74696.2-201ENST00000436514 498 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 RSU1P2-202ENST00000437884 485 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.03□□□□□ -1.76
PTPN9P43378 AL592447.1-201ENST00000447592 540 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 EPS15P1-201ENST00000448836 336 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 AC005297.2-201ENST00000450430 606 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN9P43378 SNRPFP4-201ENST00000456366 242 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 RPS20P24-201ENST00000457473 361 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 AP001992.1-205ENST00000462248 379 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PTPN9P43378 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN9P43378 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN9P43378 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN9P43378 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPN9P43378 IGKV2D-36-201ENST00000518643 226 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 RPL12P22-201ENST00000519073 490 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 AC060788.1-201ENST00000521318 469 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 OR8R1P-201ENST00000543943 764 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.03□□□□□ -1.76
PTPN9P43378 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN9P43378 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPN9P43378 AC020914.4-201ENST00000597690 277 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 AL606490.9-201ENST00000603331 271 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 HMGB1P50-201ENST00000605814 607 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 AL390208.1-201ENST00000605885 644 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 AC009878.1-201ENST00000621819 340 ntBASIC4.03□□□□□ -1.76
PTPN9P43378 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN9P43378 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTPN9P43378 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms