Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.2□□□□□ -2.06
HTTP42858 AL353597.2-202ENST00000434901 373 ntBASIC2.2□□□□□ -2.06
HTTP42858 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.2□□□□□ -2.06
HTTP42858 HMGB3P8-201ENST00000449709 577 ntBASIC2.2□□□□□ -2.06
HTTP42858 AC133473.1-201ENST00000455173 299 ntBASIC2.2□□□□□ -2.06
HTTP42858 RNA5SP61-201ENST00000516453 100 ntBASIC2.2□□□□□ -2.06
HTTP42858 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HTTP42858 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.2□□□□□ -2.06
HTTP42858 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.2□□□□□ -2.06
HTTP42858 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.2□□□□□ -2.06
HTTP42858 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.2□□□□□ -2.06
HTTP42858 ASNSP4-201ENST00000511103 447 ntBASIC2.2□□□□□ -2.06
HTTP42858 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.2□□□□□ -2.06
HTTP42858 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.2□□□□□ -2.06
HTTP42858 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HTTP42858 OR1S1-201ENST00000624470 978 ntBASIC2.2□□□□□ -2.06
HTTP42858 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.2□□□□□ -2.06
HTTP42858 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.2□□□□□ -2.06
HTTP42858 AC234782.4-201ENST00000417646 1048 ntBASIC2.2□□□□□ -2.06
HTTP42858 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.2□□□□□ -2.06
HTTP42858 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.2□□□□□ -2.06
HTTP42858 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.2□□□□□ -2.06
HTTP42858 XPOTP1-201ENST00000443317 2398 ntBASIC2.19□□□□□ -2.06
HTTP42858 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HTTP42858 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HTTP42858 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HTTP42858 RNU4-44P-201ENST00000363050 141 ntBASIC2.19□□□□□ -2.06
HTTP42858 SNORA48.3-201ENST00000391081 134 ntBASIC2.19□□□□□ -2.06
HTTP42858 AC005005.2-201ENST00000420779 380 ntBASIC2.19□□□□□ -2.06
HTTP42858 CBWD4P-201ENST00000445695 655 ntBASIC2.19□□□□□ -2.06
HTTP42858 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.19□□□□□ -2.06
HTTP42858 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC2.19□□□□□ -2.06
HTTP42858 AC011352.3-201ENST00000505162 593 ntBASIC2.19□□□□□ -2.06
HTTP42858 AC135279.1-201ENST00000543493 504 ntBASIC2.19□□□□□ -2.06
HTTP42858 AC073387.2-201ENST00000604797 784 ntBASIC2.19□□□□□ -2.06
HTTP42858 AC120053.1-201ENST00000607706 736 ntBASIC2.19□□□□□ -2.06
HTTP42858 MIR6504-201ENST00000613520 61 ntBASIC2.19□□□□□ -2.06
HTTP42858 Y_RNA.783-201ENST00000613546 102 ntBASIC2.19□□□□□ -2.06
HTTP42858 AC022336.2-201ENST00000568966 2538 ntBASIC2.19□□□□□ -2.06
HTTP42858 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HTTP42858 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HTTP42858 AL590762.3-201ENST00000436372 640 ntBASIC2.19□□□□□ -2.06
HTTP42858 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.19□□□□□ -2.06
HTTP42858 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HTTP42858 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.19□□□□□ -2.06
HTTP42858 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.19□□□□□ -2.06
HTTP42858 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.19□□□□□ -2.06
HTTP42858 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.19□□□□□ -2.06
HTTP42858 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
HTTP42858 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.19□□□□□ -2.06
HTTP42858 RAD1P1-201ENST00000231383 813 ntBASIC2.18□□□□□ -2.06
HTTP42858 RNY1-201ENST00000364228 113 ntBASIC2.18□□□□□ -2.06
HTTP42858 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.18□□□□□ -2.06
HTTP42858 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.18□□□□□ -2.06
HTTP42858 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.18□□□□□ -2.06
HTTP42858 AL121594.1-201ENST00000475906 575 ntBASIC2.18□□□□□ -2.06
HTTP42858 AC012360.2-201ENST00000609349 391 ntBASIC2.18□□□□□ -2.06
HTTP42858 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HTTP42858 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.18□□□□□ -2.06
HTTP42858 AC010680.1-201ENST00000590024 3590 ntBASIC2.18□□□□□ -2.06
HTTP42858 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HTTP42858 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HTTP42858 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.18□□□□□ -2.06
HTTP42858 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.18□□□□□ -2.06
HTTP42858 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HTTP42858 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.18□□□□□ -2.06
HTTP42858 AL356280.1-201ENST00000603614 379 ntBASIC2.18□□□□□ -2.06
HTTP42858 MIR6895-201ENST00000613497 78 ntBASIC2.18□□□□□ -2.06
HTTP42858 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HTTP42858 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HTTP42858 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HTTP42858 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HTTP42858 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HTTP42858 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
HTTP42858 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
HTTP42858 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
HTTP42858 ZNF355P-201ENST00000427301 3216 ntBASIC2.17□□□□□ -2.06
HTTP42858 AL606537.1-201ENST00000607258 2011 ntBASIC2.17□□□□□ -2.06
HTTP42858 SNORD114-22-201ENST00000365423 72 ntBASIC2.17□□□□□ -2.06
HTTP42858 RNU6-342P-201ENST00000384521 104 ntBASIC2.17□□□□□ -2.06
HTTP42858 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.17□□□□□ -2.06
HTTP42858 VN1R31P-201ENST00000417498 730 ntBASIC2.17□□□□□ -2.06
HTTP42858 RPS7P2-201ENST00000435134 607 ntBASIC2.17□□□□□ -2.06
HTTP42858 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.17□□□□□ -2.06
HTTP42858 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HTTP42858 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HTTP42858 AC093536.2-201ENST00000565257 1406 ntBASIC2.17□□□□□ -2.06
HTTP42858 DCAF13P1-201ENST00000495256 1330 ntBASIC2.17□□□□□ -2.06
HTTP42858 RNU1-51P-201ENST00000365345 176 ntBASIC2.17□□□□□ -2.06
HTTP42858 RPS15AP6-201ENST00000420703 385 ntBASIC2.17□□□□□ -2.06
HTTP42858 RPS12P5-201ENST00000423449 371 ntBASIC2.17□□□□□ -2.06
HTTP42858 YWHAZP7-201ENST00000436906 631 ntBASIC2.17□□□□□ -2.06
HTTP42858 SDR42E1P3-201ENST00000438345 502 ntBASIC2.17□□□□□ -2.06
HTTP42858 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.17□□□□□ -2.06
HTTP42858 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.17□□□□□ -2.06
HTTP42858 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HTTP42858 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC2.16□□□□□ -2.06
HTTP42858 AC009487.2-201ENST00000420969 6821 ntBASIC2.16□□□□□ -2.06
HTTP42858 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HTTP42858 RPL36AP6-201ENST00000435770 321 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms