Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCLP35914 ELL2P4-201ENST00000446870 1376 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HMGCLP35914 RNU1-75P-201ENST00000347264 129 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCLP35914 SNORD113-6-201ENST00000363345 75 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCLP35914 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HMGCLP35914 MIR649-201ENST00000384843 97 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 RNA5SP80-201ENST00000410475 111 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 RNA5SP229-201ENST00000410809 99 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCLP35914 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCLP35914 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCLP35914 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCLP35914 SEPT7P5-201ENST00000434048 306 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 BX679664.1-201ENST00000434429 253 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCLP35914 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCLP35914 VN1R17P-201ENST00000472048 1090 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 RPS27AP1-201ENST00000475545 471 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 AC021678.1-201ENST00000505195 936 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 AC110794.1-201ENST00000505816 425 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 AC008837.2-201ENST00000513076 418 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 RNU6-1261P-201ENST00000517194 104 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.28□□□□□ -1.88
HMGCLP35914 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
HMGCLP35914 OR8L1P-201ENST00000534005 955 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCLP35914 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCLP35914 MIR4474-201ENST00000579189 78 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 SNORD39.3-201ENST00000584451 71 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCLP35914 CKS1BP3-201ENST00000600888 237 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 AL390838.2-201ENST00000602394 274 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.28□□□□□ -1.88
HMGCLP35914 AC092106.3-201ENST00000611308 722 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 AL157817.1-201ENST00000614264 790 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 AC084757.4-201ENST00000616350 526 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.28□□□□□ -1.88
HMGCLP35914 AC073476.4-201ENST00000628409 72 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 AC068620.4-201ENST00000636730 1182 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 AC006927.4-201ENST00000639187 543 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 ZNF663P-202ENST00000641770 1131 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCLP35914 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
HMGCLP35914 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.28□□□□□ -1.88
HMGCLP35914 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HMGCLP35914 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCLP35914 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGCLP35914 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HMGCLP35914 MTND4P34-201ENST00000572715 1371 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGCLP35914 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCLP35914 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCLP35914 AC109315.1-201ENST00000584143 1347 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCLP35914 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCLP35914 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGCLP35914 RNU6-805P-201ENST00000365643 106 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 Y_RNA.408-201ENST00000383987 102 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 AC119751.3-201ENST00000399720 670 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 EIF5P1-201ENST00000400019 1231 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 BTBD10P2-201ENST00000404779 676 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 AL136133.1-201ENST00000413694 376 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 RPS24P7-201ENST00000416921 246 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 MTCO2P21-201ENST00000419780 677 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGCLP35914 TRIAP1P1-201ENST00000427062 225 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGCLP35914 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGCLP35914 AC092393.1-201ENST00000439625 742 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 HMGB3P11-201ENST00000440127 604 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCLP35914 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGCLP35914 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.27□□□□□ -1.89
HMGCLP35914 MTCO2P25-201ENST00000447065 681 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 Z99127.3-201ENST00000448158 395 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 ARPC3P2-201ENST00000457786 533 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 AC091153.1-201ENST00000466297 402 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.27□□□□□ -1.89
HMGCLP35914 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGCLP35914 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.27□□□□□ -1.89
HMGCLP35914 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCLP35914 MTCYBP37-201ENST00000510642 1133 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGCLP35914 SNORA48.10-201ENST00000516965 160 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 Y_RNA.717-201ENST00000517106 92 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 RNA5SP380-201ENST00000517190 98 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 RN7SKP289-201ENST00000517244 295 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGCLP35914 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCLP35914 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGCLP35914 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGCLP35914 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCLP35914 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGCLP35914 HIGD1AP1-201ENST00000550979 275 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 TRAV37-201ENST00000553906 342 ntBASIC3.27□□□□□ -1.89
HMGCLP35914 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms