Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 COX6B1P6-201ENST00000522347 255 ntBASIC3.1□□□□□ -1.91
HOXA9P31269 OR5G4P-201ENST00000525251 760 ntBASIC3.1□□□□□ -1.91
HOXA9P31269 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA9P31269 AP003066.2-201ENST00000529375 555 ntBASIC3.1□□□□□ -1.91
HOXA9P31269 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.1□□□□□ -1.91
HOXA9P31269 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXA9P31269 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXA9P31269 AC138761.3-201ENST00000579993 334 ntBASIC3.1□□□□□ -1.91
HOXA9P31269 YWHAQP7-201ENST00000603536 658 ntBASIC3.1□□□□□ -1.91
HOXA9P31269 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXA9P31269 AC078880.5-201ENST00000617845 421 ntBASIC3.1□□□□□ -1.91
HOXA9P31269 RNU6-156P-201ENST00000621869 107 ntBASIC3.1□□□□□ -1.91
HOXA9P31269 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA9P31269 AL136520.1-201ENST00000600311 1322 ntBASIC3.1□□□□□ -1.91
HOXA9P31269 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA9P31269 NSRP1P1-201ENST00000444067 1693 ntBASIC3.1□□□□□ -1.91
HOXA9P31269 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA9P31269 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXA9P31269 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXA9P31269 SEC63P2-201ENST00000503863 1939 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HOXA9P31269 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
HOXA9P31269 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXA9P31269 AC062016.1-201ENST00000355719 319 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXA9P31269 AP002784.2-201ENST00000397300 549 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 RNU4-65P-201ENST00000410473 140 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA9P31269 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXA9P31269 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA9P31269 NUP35P1-201ENST00000422734 947 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXA9P31269 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXA9P31269 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA9P31269 HMGB1P48-201ENST00000446155 598 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 DNAJC19P8-201ENST00000452887 259 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXA9P31269 GTF2IP12-201ENST00000456547 356 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 MTND2P39-201ENST00000457230 764 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 KC877373.1-201ENST00000479066 408 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HOXA9P31269 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA9P31269 KCTD9P5-201ENST00000504141 1170 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 MTND3P3-201ENST00000505004 126 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXA9P31269 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA9P31269 RNA5SP468-201ENST00000516782 93 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 RN7SKP282-201ENST00000516824 299 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA9P31269 AP001207.2-201ENST00000519490 539 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 AC245166.1-201ENST00000521012 253 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 AC139103.1-201ENST00000534696 1030 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXA9P31269 ATP5F1P7-201ENST00000567330 760 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXA9P31269 AC024153.1-201ENST00000603103 365 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 AP003400.6-201ENST00000624698 740 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 AL590396.2-201ENST00000636511 1041 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 AC004944.1-201ENST00000517807 3059 ntBASIC3.09□□□□□ -1.91
HOXA9P31269 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HOXA9P31269 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HOXA9P31269 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXA9P31269 AC069282.1-201ENST00000411911 526 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 RPL32P35-201ENST00000415214 394 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 TOMM22P1-201ENST00000418578 312 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXA9P31269 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXA9P31269 AC063976.3-201ENST00000426849 329 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXA9P31269 FABP5P3-201ENST00000437960 408 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 MRPL35P4-201ENST00000453682 566 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXA9P31269 SYPL1P1-201ENST00000473622 768 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 RN7SL429P-201ENST00000479090 223 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 RN7SL489P-201ENST00000486185 223 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 RN7SL327P-201ENST00000488659 223 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 RN7SL20P-201ENST00000488827 297 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXA9P31269 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXA9P31269 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXA9P31269 RN7SKP132-201ENST00000516001 208 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 COX6CP8-201ENST00000522620 226 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 AP003102.1-201ENST00000525638 661 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 AC239860.2-201ENST00000525886 270 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.08□□□□□ -1.92
HOXA9P31269 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXA9P31269 AC023825.1-201ENST00000566704 1030 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 MIR4319-201ENST00000577285 85 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 AC090666.1-201ENST00000578241 445 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 DNAJC19P3-201ENST00000594491 331 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 NTAN1P1-201ENST00000603150 646 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 AC068831.7-201ENST00000616954 363 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 RN7SL853P-201ENST00000617250 223 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 AC093875.1-201ENST00000623688 504 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 AC107081.3-201ENST00000612715 2034 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 PABPC1P7-201ENST00000413177 1513 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms