Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ABCD3P28288 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ABCD3P28288 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.86□□□□□ -1.79
ABCD3P28288 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.86□□□□□ -1.79
ABCD3P28288 MARK2P15-201ENST00000432204 2186 ntBASIC3.86□□□□□ -1.79
ABCD3P28288 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
ABCD3P28288 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ABCD3P28288 AP002001.2-201ENST00000529025 1469 ntBASIC3.86□□□□□ -1.79
ABCD3P28288 MTND5P33-201ENST00000571250 1450 ntBASIC3.86□□□□□ -1.79
ABCD3P28288 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ABCD3P28288 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ABCD3P28288 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ABCD3P28288 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ABCD3P28288 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
ABCD3P28288 RNU6-637P-201ENST00000384050 107 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 RPS3AP24-201ENST00000407896 734 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.85□□□□□ -1.79
ABCD3P28288 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.85□□□□□ -1.79
ABCD3P28288 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.85□□□□□ -1.79
ABCD3P28288 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.85□□□□□ -1.79
ABCD3P28288 OR4K11P-201ENST00000431829 904 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 SKP1P1-201ENST00000438081 489 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.85□□□□□ -1.79
ABCD3P28288 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.85□□□□□ -1.79
ABCD3P28288 AC007967.1-201ENST00000455422 1159 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
ABCD3P28288 RPL23AP41-201ENST00000484754 458 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 AC006499.6-201ENST00000511169 607 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 RNU6-1003P-201ENST00000517099 105 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 RN7SKP289-201ENST00000517244 295 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.85□□□□□ -1.79
ABCD3P28288 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.85□□□□□ -1.79
ABCD3P28288 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.85□□□□□ -1.79
ABCD3P28288 AC063950.1-201ENST00000552036 308 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.85□□□□□ -1.79
ABCD3P28288 AC009101.1-201ENST00000568135 242 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 ROCK1P1-201ENST00000573767 549 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 AC022655.2-201ENST00000577280 318 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 UBE2L4-201ENST00000587688 464 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.85□□□□□ -1.79
ABCD3P28288 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.85□□□□□ -1.79
ABCD3P28288 AL031666.3-201ENST00000609320 1006 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 AC023043.4-201ENST00000612081 449 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
ABCD3P28288 AL158801.5-201ENST00000623123 465 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ABCD3P28288 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ABCD3P28288 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.85□□□□□ -1.79
ABCD3P28288 AC092125.1-201ENST00000562568 1995 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 ZNF833P-201ENST00000424938 1494 ntBASIC3.85□□□□□ -1.79
ABCD3P28288 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
ABCD3P28288 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ABCD3P28288 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.84□□□□□ -1.79
ABCD3P28288 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
ABCD3P28288 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.84□□□□□ -1.79
ABCD3P28288 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ABCD3P28288 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
ABCD3P28288 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
ABCD3P28288 AC009812.4-201ENST00000569134 1805 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ABCD3P28288 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
ABCD3P28288 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.84□□□□□ -1.79
ABCD3P28288 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
ABCD3P28288 MIR3074-201ENST00000384885 81 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 MT-TH-201ENST00000387441 69 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ABCD3P28288 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ABCD3P28288 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.84□□□□□ -1.79
ABCD3P28288 RPL17P12-201ENST00000413391 526 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 RPL7AP73-201ENST00000413490 353 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 AC233728.2-201ENST00000425348 757 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 RSL24D1P6-201ENST00000426934 401 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 AC092017.2-201ENST00000427600 362 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.84□□□□□ -1.79
ABCD3P28288 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.84□□□□□ -1.79
ABCD3P28288 RPL23AP89-201ENST00000439324 255 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.84□□□□□ -1.79
ABCD3P28288 RAD23BP3-201ENST00000454157 1152 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.84□□□□□ -1.79
ABCD3P28288 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.84□□□□□ -1.79
ABCD3P28288 AC116337.2-201ENST00000477662 156 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.84□□□□□ -1.79
ABCD3P28288 AC139783.2-201ENST00000504847 1145 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.84□□□□□ -1.79
ABCD3P28288 AC105914.1-201ENST00000511798 226 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 AC025881.1-201ENST00000518851 512 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.84□□□□□ -1.79
ABCD3P28288 MTCO1P49-201ENST00000523429 802 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 MTND4LP18-201ENST00000526864 291 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.84□□□□□ -1.79
ABCD3P28288 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.84□□□□□ -1.79
ABCD3P28288 PARP1P2-201ENST00000556806 195 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.84□□□□□ -1.79
ABCD3P28288 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.84□□□□□ -1.79
ABCD3P28288 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
ABCD3P28288 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
ABCD3P28288 MIR7702-201ENST00000621931 59 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 AL159972.1-201ENST00000625150 448 ntBASIC3.84□□□□□ -1.79
ABCD3P28288 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.84□□□□□ -1.79
ABCD3P28288 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms