Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.4□□□□□ -2.03
COL8A2P25067 AC083760.1-201ENST00000589621 670 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AC078899.3-201ENST00000599065 212 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.4□□□□□ -2.03
COL8A2P25067 AC024153.1-201ENST00000603103 365 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 STMN1P1-201ENST00000617809 440 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 FRG1HP-204ENST00000617940 757 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AL391262.2-201ENST00000622466 494 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AL049777.1-201ENST00000622740 518 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 AC092184.1-201ENST00000625042 715 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.4□□□□□ -2.03
COL8A2P25067 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.4□□□□□ -2.03
COL8A2P25067 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
COL8A2P25067 AL161431.1-201ENST00000618966 4205 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 NSRP1P1-201ENST00000444067 1693 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
COL8A2P25067 AC104446.1-201ENST00000613728 1321 ntBASIC2.4□□□□□ -2.03
COL8A2P25067 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
COL8A2P25067 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL8A2P25067 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
COL8A2P25067 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL8A2P25067 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
COL8A2P25067 SEC63P2-201ENST00000503863 1939 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.39□□□□□ -2.03
COL8A2P25067 RNU6-600P-201ENST00000362524 99 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
COL8A2P25067 MIR887-201ENST00000401258 79 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 RPL23AP47-201ENST00000408017 460 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.39□□□□□ -2.03
COL8A2P25067 RNA5SP344-201ENST00000411081 104 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 BMS1P22-201ENST00000414726 313 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.39□□□□□ -2.03
COL8A2P25067 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.39□□□□□ -2.03
COL8A2P25067 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.39□□□□□ -2.03
COL8A2P25067 AC013262.1-201ENST00000426710 252 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AL390023.1-201ENST00000428836 262 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
COL8A2P25067 AC068135.1-201ENST00000446164 246 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.39□□□□□ -2.03
COL8A2P25067 GAPDHP27-201ENST00000447427 1020 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AL096803.2-201ENST00000450032 677 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.39□□□□□ -2.03
COL8A2P25067 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.39□□□□□ -2.03
COL8A2P25067 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.39□□□□□ -2.03
COL8A2P25067 RPL23AP55-201ENST00000498163 452 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.39□□□□□ -2.03
COL8A2P25067 RN7SKP43-201ENST00000516173 320 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 SNORA31.26-201ENST00000517250 137 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AC019227.1-201ENST00000526902 510 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.39□□□□□ -2.03
COL8A2P25067 AC087894.1-201ENST00000538359 518 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.39□□□□□ -2.03
COL8A2P25067 AC079600.2-201ENST00000550076 130 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.39□□□□□ -2.03
COL8A2P25067 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.39□□□□□ -2.03
COL8A2P25067 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.39□□□□□ -2.03
COL8A2P25067 ATP5F1P7-201ENST00000567330 760 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 HMGB1P6-201ENST00000569046 646 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AC068620.3-201ENST00000602749 560 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AC024595.1-201ENST00000623088 387 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.39□□□□□ -2.03
COL8A2P25067 LRRC77P-213ENST00000637727 880 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.39□□□□□ -2.03
COL8A2P25067 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL8A2P25067 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL8A2P25067 MTND4P9-201ENST00000507819 1346 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 AL355596.1-201ENST00000565399 3996 ntBASIC2.39□□□□□ -2.03
COL8A2P25067 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.38□□□□□ -2.03
COL8A2P25067 MTND4P8-201ENST00000514997 1362 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL8A2P25067 ENSAP3-201ENST00000312710 333 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.38□□□□□ -2.03
COL8A2P25067 RNU1-35P-201ENST00000362782 153 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 RNU1-112P-201ENST00000364401 164 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 UBE2V1P2-201ENST00000397758 440 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.38□□□□□ -2.03
COL8A2P25067 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.38□□□□□ -2.03
COL8A2P25067 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.38□□□□□ -2.03
COL8A2P25067 AC005517.2-201ENST00000424673 553 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.38□□□□□ -2.03
COL8A2P25067 FO393414.1-201ENST00000428697 1184 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 UBE2V1P5-201ENST00000440070 405 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 AL662791.1-201ENST00000441992 928 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 AC004865.1-201ENST00000442276 1003 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 Z77249.1-201ENST00000444622 1175 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 AC108938.1-201ENST00000451204 136 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
COL8A2P25067 RPS15AP1-201ENST00000457423 391 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 RPS27AP1-201ENST00000475545 471 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.38□□□□□ -2.03
COL8A2P25067 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.38□□□□□ -2.03
COL8A2P25067 HMGB3P15-201ENST00000507326 574 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.38□□□□□ -2.03
COL8A2P25067 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.38□□□□□ -2.03
COL8A2P25067 AC008565.1-201ENST00000509046 885 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 MTCO1P24-201ENST00000515438 1558 ntBASIC2.38□□□□□ -2.03
COL8A2P25067 RNA5SP76-201ENST00000516277 87 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms