Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC005086.4-201ENST00000623065 213 ntBASIC4.53□□□□□ -1.68
POLR2AP24928 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.53□□□□□ -1.68
POLR2AP24928 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
POLR2AP24928 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
POLR2AP24928 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
POLR2AP24928 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
POLR2AP24928 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
POLR2AP24928 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
POLR2AP24928 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
POLR2AP24928 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
POLR2AP24928 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
POLR2AP24928 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 AC125336.1-201ENST00000508893 2827 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 SNORD9-201ENST00000362566 104 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 RNU6-251P-201ENST00000363235 104 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 HMGB3P23-201ENST00000414981 585 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 RPL21P111-201ENST00000418453 477 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.52□□□□□ -1.69
POLR2AP24928 AL590609.2-201ENST00000421430 368 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 RPL36AP10-201ENST00000421785 322 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 AL158156.1-201ENST00000422509 473 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.52□□□□□ -1.69
POLR2AP24928 AC009961.2-201ENST00000435771 251 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.52□□□□□ -1.69
POLR2AP24928 NFU1P2-201ENST00000448700 469 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.52□□□□□ -1.69
POLR2AP24928 APOOP2-201ENST00000461561 539 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 AL133162.1-201ENST00000463228 453 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 AL136126.1-201ENST00000473603 402 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 AC096576.1-201ENST00000489014 359 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 AC021678.1-201ENST00000505195 936 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.52□□□□□ -1.69
POLR2AP24928 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.52□□□□□ -1.69
POLR2AP24928 Y_RNA.701-201ENST00000516812 110 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 RN7SKP289-201ENST00000517244 295 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.52□□□□□ -1.69
POLR2AP24928 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.52□□□□□ -1.69
POLR2AP24928 TRAV15-201ENST00000556680 249 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.52□□□□□ -1.69
POLR2AP24928 AC009101.1-201ENST00000568135 242 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.52□□□□□ -1.69
POLR2AP24928 AC009033.1-201ENST00000624279 431 ntBASIC4.52□□□□□ -1.69
POLR2AP24928 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
POLR2AP24928 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.52□□□□□ -1.69
POLR2AP24928 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.52□□□□□ -1.69
POLR2AP24928 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
POLR2AP24928 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
POLR2AP24928 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
POLR2AP24928 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
POLR2AP24928 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.51□□□□□ -1.69
POLR2AP24928 RPL23AP47-201ENST00000408017 460 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
POLR2AP24928 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.51□□□□□ -1.69
POLR2AP24928 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
POLR2AP24928 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.51□□□□□ -1.69
POLR2AP24928 AC017083.1-201ENST00000428093 483 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
POLR2AP24928 Z75741.1-201ENST00000446793 314 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 AL445433.1-201ENST00000457507 257 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 MTND5P4-201ENST00000514978 288 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.51□□□□□ -1.69
POLR2AP24928 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.51□□□□□ -1.69
POLR2AP24928 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.51□□□□□ -1.69
POLR2AP24928 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.51□□□□□ -1.69
POLR2AP24928 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.51□□□□□ -1.69
POLR2AP24928 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.51□□□□□ -1.69
POLR2AP24928 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.51□□□□□ -1.69
POLR2AP24928 AL161729.4-201ENST00000604650 476 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 AC243773.3-201ENST00000613270 256 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.51□□□□□ -1.69
POLR2AP24928 FAM157B-203ENST00000639350 358 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
POLR2AP24928 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
POLR2AP24928 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
POLR2AP24928 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
POLR2AP24928 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.51□□□□□ -1.69
POLR2AP24928 RNU1-15P-201ENST00000353977 144 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 SNORA51.2-201ENST00000364595 132 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.51□□□□□ -1.69
POLR2AP24928 RNU6-1122P-201ENST00000384449 107 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 SNORD115.1-201ENST00000391109 76 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 MTCYBP36-201ENST00000404146 440 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 MIR1303-201ENST00000408625 86 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 ATP5A1P2-201ENST00000412323 255 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 AC236972.1-201ENST00000433225 199 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 AC244505.5-201ENST00000443639 207 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 FDX1P2-201ENST00000450769 375 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 RPL23AP35-201ENST00000451906 501 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 TMED11P-201ENST00000479478 690 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.51□□□□□ -1.69
POLR2AP24928 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
POLR2AP24928 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
POLR2AP24928 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.51□□□□□ -1.69
POLR2AP24928 AC087045.1-201ENST00000605856 382 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 AL132765.2-201ENST00000610812 351 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 AL591424.2-201ENST00000617023 128 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 AP006248.2-201ENST00000623309 592 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 MIR1321-201ENST00000637766 79 ntBASIC4.51□□□□□ -1.69
POLR2AP24928 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms