Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 NANOGNBP1-201ENST00000448444 480 ntBASIC2.74□□□□□ -1.97
USF1P22415 RSL24D1P3-201ENST00000449255 495 ntBASIC2.74□□□□□ -1.97
USF1P22415 HMGN1P18-201ENST00000457642 277 ntBASIC2.74□□□□□ -1.97
USF1P22415 RN7SL863P-201ENST00000462370 296 ntBASIC2.74□□□□□ -1.97
USF1P22415 AC011825.1-201ENST00000484967 388 ntBASIC2.74□□□□□ -1.97
USF1P22415 AC006445.1-201ENST00000491925 405 ntBASIC2.74□□□□□ -1.97
USF1P22415 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.74□□□□□ -1.97
USF1P22415 AC114967.1-201ENST00000504890 259 ntBASIC2.74□□□□□ -1.97
USF1P22415 SNORA64.4-201ENST00000516632 81 ntBASIC2.74□□□□□ -1.97
USF1P22415 RN7SKP282-201ENST00000516824 299 ntBASIC2.74□□□□□ -1.97
USF1P22415 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.74□□□□□ -1.97
USF1P22415 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.74□□□□□ -1.97
USF1P22415 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.74□□□□□ -1.97
USF1P22415 AP003049.1-201ENST00000529418 457 ntBASIC2.74□□□□□ -1.97
USF1P22415 AP002404.1-201ENST00000532005 451 ntBASIC2.74□□□□□ -1.97
USF1P22415 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.74□□□□□ -1.97
USF1P22415 AC022080.3-201ENST00000544433 482 ntBASIC2.74□□□□□ -1.97
USF1P22415 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.74□□□□□ -1.97
USF1P22415 EIF4BP1-201ENST00000554881 351 ntBASIC2.74□□□□□ -1.97
USF1P22415 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.74□□□□□ -1.97
USF1P22415 AC093510.2-201ENST00000562820 896 ntBASIC2.74□□□□□ -1.97
USF1P22415 AC093519.1-201ENST00000566109 298 ntBASIC2.74□□□□□ -1.97
USF1P22415 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.74□□□□□ -1.97
USF1P22415 SNORD84-203ENST00000584275 78 ntBASIC2.74□□□□□ -1.97
USF1P22415 AC067852.3-201ENST00000589177 561 ntBASIC2.74□□□□□ -1.97
USF1P22415 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.74□□□□□ -1.97
USF1P22415 AP005229.2-201ENST00000609980 697 ntBASIC2.74□□□□□ -1.97
USF1P22415 VN1R74P-201ENST00000613259 503 ntBASIC2.74□□□□□ -1.97
USF1P22415 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.74□□□□□ -1.97
USF1P22415 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.74□□□□□ -1.97
USF1P22415 AC040168.1-201ENST00000623594 991 ntBASIC2.74□□□□□ -1.97
USF1P22415 AC093875.1-201ENST00000623688 504 ntBASIC2.74□□□□□ -1.97
USF1P22415 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
USF1P22415 AL512506.2-201ENST00000624472 458 ntBASIC2.74□□□□□ -1.97
USF1P22415 FAM35CP-201ENST00000554755 2470 ntBASIC2.74□□□□□ -1.97
USF1P22415 API5P2-201ENST00000397055 1498 ntBASIC2.73□□□□□ -1.97
USF1P22415 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
USF1P22415 RNA5SP383-201ENST00000362934 120 ntBASIC2.73□□□□□ -1.97
USF1P22415 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
USF1P22415 AL024474.1-201ENST00000404655 591 ntBASIC2.73□□□□□ -1.97
USF1P22415 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.73□□□□□ -1.97
USF1P22415 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.73□□□□□ -1.97
USF1P22415 AC099677.1-201ENST00000420575 175 ntBASIC2.73□□□□□ -1.97
USF1P22415 AC012065.2-201ENST00000421295 375 ntBASIC2.73□□□□□ -1.97
USF1P22415 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.73□□□□□ -1.97
USF1P22415 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.73□□□□□ -1.97
USF1P22415 AC236972.1-201ENST00000433225 199 ntBASIC2.73□□□□□ -1.97
USF1P22415 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.73□□□□□ -1.97
USF1P22415 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.73□□□□□ -1.97
USF1P22415 AC241584.1-201ENST00000438469 1241 ntBASIC2.73□□□□□ -1.97
USF1P22415 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.73□□□□□ -1.97
USF1P22415 RPL17P49-201ENST00000443728 411 ntBASIC2.73□□□□□ -1.97
USF1P22415 SEPT14P24-201ENST00000447236 180 ntBASIC2.73□□□□□ -1.97
USF1P22415 MTND2P19-201ENST00000449129 1012 ntBASIC2.73□□□□□ -1.97
USF1P22415 AC140076.1-201ENST00000449897 361 ntBASIC2.73□□□□□ -1.97
USF1P22415 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.73□□□□□ -1.97
USF1P22415 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.73□□□□□ -1.97
USF1P22415 RPL21P8-201ENST00000465083 535 ntBASIC2.73□□□□□ -1.97
USF1P22415 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.73□□□□□ -1.97
USF1P22415 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.73□□□□□ -1.97
USF1P22415 AC096751.1-202ENST00000502691 1067 ntBASIC2.73□□□□□ -1.97
USF1P22415 AC093767.1-201ENST00000504523 156 ntBASIC2.73□□□□□ -1.97
USF1P22415 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.73□□□□□ -1.97
USF1P22415 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.73□□□□□ -1.97
USF1P22415 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.73□□□□□ -1.97
USF1P22415 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.73□□□□□ -1.97
USF1P22415 AC126177.3-201ENST00000551839 688 ntBASIC2.73□□□□□ -1.97
USF1P22415 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.73□□□□□ -1.97
USF1P22415 SULT1C2P1-202ENST00000562418 459 ntBASIC2.73□□□□□ -1.97
USF1P22415 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.73□□□□□ -1.97
USF1P22415 MIR4506-201ENST00000584693 77 ntBASIC2.73□□□□□ -1.97
USF1P22415 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.73□□□□□ -1.97
USF1P22415 AC092474.3-201ENST00000603022 568 ntBASIC2.73□□□□□ -1.97
USF1P22415 AL512506.1-201ENST00000613918 449 ntBASIC2.73□□□□□ -1.97
USF1P22415 AL355810.1-201ENST00000614629 552 ntBASIC2.73□□□□□ -1.97
USF1P22415 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.73□□□□□ -1.97
USF1P22415 SNORD39.4-201ENST00000620099 78 ntBASIC2.73□□□□□ -1.97
USF1P22415 MIR6852-201ENST00000621699 66 ntBASIC2.73□□□□□ -1.97
USF1P22415 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.73□□□□□ -1.97
USF1P22415 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.73□□□□□ -1.97
USF1P22415 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.73□□□□□ -1.97
USF1P22415 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
USF1P22415 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
USF1P22415 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
USF1P22415 AL049780.3-201ENST00000624612 1583 ntBASIC2.73□□□□□ -1.97
USF1P22415 NUP58P1-201ENST00000502546 1738 ntBASIC2.73□□□□□ -1.97
USF1P22415 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.73□□□□□ -1.97
USF1P22415 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.72□□□□□ -1.97
USF1P22415 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.72□□□□□ -1.97
USF1P22415 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
USF1P22415 RNU6-839P-201ENST00000363347 108 ntBASIC2.72□□□□□ -1.97
USF1P22415 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
USF1P22415 RNU1-101P-201ENST00000391171 127 ntBASIC2.72□□□□□ -1.97
USF1P22415 MIR887-201ENST00000401258 79 ntBASIC2.72□□□□□ -1.97
USF1P22415 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
USF1P22415 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.72□□□□□ -1.97
USF1P22415 MTATP6P11-201ENST00000428071 670 ntBASIC2.72□□□□□ -1.97
USF1P22415 SGO1P2-201ENST00000429458 1589 ntBASIC2.72□□□□□ -1.97
USF1P22415 RPL23AP69-201ENST00000431134 458 ntBASIC2.72□□□□□ -1.97
USF1P22415 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms