Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RSL24D1P6-201ENST00000426934 401 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 AC006548.1-201ENST00000427470 102 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 AC127537.2-201ENST00000439258 465 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 AC114495.1-201ENST00000441274 436 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 HMGN2P26-201ENST00000463169 339 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 RPL38P4-201ENST00000502376 214 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 COPS8P3-201ENST00000526024 482 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 MIR4420-201ENST00000583944 77 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 AP001330.4-201ENST00000604350 154 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 AC079597.1-201ENST00000624306 508 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 CR381572.1-201ENST00000625098 102 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 Z95327.2-201ENST00000414579 1873 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 AC139713.2-214ENST00000642059 1811 ntBASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.59□□□□□ -1.35
CSB-PGBD3P0DP91 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
CSB-PGBD3P0DP91 DHX40P1-201ENST00000588725 1412 ntBASIC6.59□□□□□ -1.36
CSB-PGBD3P0DP91 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 RNU6-831P-201ENST00000384548 107 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 U3.20-201ENST00000390909 217 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 RNY4P36-201ENST00000391116 96 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 CISD1P1-201ENST00000393907 327 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 RNU6-1304P-201ENST00000411374 106 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AC114482.1-201ENST00000418010 247 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 RPL17P36-201ENST00000420302 549 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AC009238.2-201ENST00000431026 355 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 RPL32P28-201ENST00000443577 397 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AF213884.1-201ENST00000488102 463 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 TTC39CP1-201ENST00000512513 755 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 MTCO2P24-201ENST00000515611 426 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 RNU6-1220P-201ENST00000517126 108 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 SNORA25.17-201ENST00000517184 124 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AL163153.1-201ENST00000554223 283 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AL590392.1-201ENST00000604960 446 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 Z84480.1-201ENST00000605131 311 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AL354950.2-201ENST00000617939 290 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 MIR6839-201ENST00000620425 113 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 AL359757.2-201ENST00000624309 274 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 MIR6830-201ENST00000636015 70 ntBASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CSB-PGBD3P0DP91 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 AC073343.1-201ENST00000328239 651 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 RNY4P16-201ENST00000364768 94 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 MT-TG-201ENST00000387429 68 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 AL592114.1-201ENST00000403842 483 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 Y_RNA.615-201ENST00000410769 117 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 RPL31P2-201ENST00000413849 377 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 AL451054.2-201ENST00000420896 202 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 CHIAP3-201ENST00000423668 1133 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 RPL19P16-201ENST00000433839 588 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 EIF4A1P11-201ENST00000451239 222 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 VN1R17P-201ENST00000472048 1090 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 AC021382.1-201ENST00000483523 359 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 IGLVIV-53-201ENST00000520107 367 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 SETP2-201ENST00000553886 926 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 MIR4716-201ENST00000579628 84 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 AC060771.1-201ENST00000582031 164 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 UBE2L4-201ENST00000587688 464 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 AC007566.2-201ENST00000603642 413 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 AC113194.1-201ENST00000606037 500 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 FAM27B-201ENST00000610601 213 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 uc_338.22-201ENST00000622722 187 ntBASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CSB-PGBD3P0DP91 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms