Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC098824.1-201ENST00000453565 980 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.97□□□□□ -1.61
HMGB1P09429 RPS26P3-201ENST00000470205 348 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AC090543.2-201ENST00000483963 348 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AC004057.1-201ENST00000485827 348 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGB1P09429 RPS15AP36-201ENST00000492022 382 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AC112198.1-201ENST00000505369 1220 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB1P09429 SNORA3.4-201ENST00000515969 96 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HMGB1P09429 AC068587.4-201ENST00000533893 186 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AC023538.1-201ENST00000534576 736 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB1P09429 OR7K1P-201ENST00000546439 926 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.97□□□□□ -1.61
HMGB1P09429 OR4T1P-201ENST00000554933 911 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.97□□□□□ -1.61
HMGB1P09429 AF038458.1-201ENST00000588406 262 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AC006116.10-201ENST00000591836 581 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AC068790.4-201ENST00000602474 263 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 MIR6820-201ENST00000611508 62 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB1P09429 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 SNORA50A-202ENST00000629536 136 ntBASIC4.97□□□□□ -1.61
HMGB1P09429 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB1P09429 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB1P09429 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB1P09429 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HMGB1P09429 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.97□□□□□ -1.61
HMGB1P09429 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.97□□□□□ -1.61
HMGB1P09429 AC005183.1-201ENST00000603687 1979 ntBASIC4.96□□□□□ -1.61
HMGB1P09429 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
HMGB1P09429 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGB1P09429 Y_RNA.302-201ENST00000364997 102 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 RNU1-64P-201ENST00000365443 163 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMGB1P09429 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB1P09429 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HMGB1P09429 AC119751.3-201ENST00000399720 670 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 AL590084.2-201ENST00000401481 382 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 TXNP7-201ENST00000406296 293 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 RNU4-25P-201ENST00000410569 230 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB1P09429 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB1P09429 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGB1P09429 COX6CP17-201ENST00000421389 185 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 AL390023.1-201ENST00000428836 262 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB1P09429 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB1P09429 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGB1P09429 AL162389.1-201ENST00000449233 177 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 RNA5SP246-201ENST00000458909 119 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB1P09429 AC093840.1-201ENST00000511599 336 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB1P09429 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.96□□□□□ -1.62
HMGB1P09429 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB1P09429 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 AC053481.4-201ENST00000583164 216 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.96□□□□□ -1.62
HMGB1P09429 TUG1_2.1-201ENST00000614234 87 ntBASIC4.96□□□□□ -1.62
HMGB1P09429 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.62
HMGB1P09429 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
HMGB1P09429 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGB1P09429 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
HMGB1P09429 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMGB1P09429 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.96□□□□□ -1.62
HMGB1P09429 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMGB1P09429 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB1P09429 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB1P09429 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB1P09429 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGB1P09429 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HMGB1P09429 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGB1P09429 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HMGB1P09429 U3.22-201ENST00000391120 215 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 EI24P2-201ENST00000397776 1076 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 RN7SKP182-201ENST00000410772 298 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 HMGN1P24-201ENST00000412282 298 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGB1P09429 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGB1P09429 AC010099.3-201ENST00000423896 409 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 AC234781.2-201ENST00000426370 994 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGB1P09429 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 AL512844.2-201ENST00000433990 593 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 UBE2FP3-201ENST00000436366 524 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 YWHAZP7-201ENST00000436906 631 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 AL831737.1-201ENST00000441288 271 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 AC104978.1-201ENST00000449387 391 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB1P09429 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGB1P09429 ATG12P2-201ENST00000456830 416 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 RPL36AP13-201ENST00000457490 317 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 RPS20P20-201ENST00000460498 340 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGB1P09429 MTND2P14-201ENST00000482139 351 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 KCTD9P5-201ENST00000504141 1170 ntBASIC4.95□□□□□ -1.62
HMGB1P09429 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms