Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TPM3P06753 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.98□□□□□ -1.93
TPM3P06753 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.98□□□□□ -1.93
TPM3P06753 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.98□□□□□ -1.93
TPM3P06753 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.98□□□□□ -1.93
TPM3P06753 RPL23AP31-201ENST00000456160 467 ntBASIC2.98□□□□□ -1.93
TPM3P06753 RNA5SP310-201ENST00000459084 116 ntBASIC2.98□□□□□ -1.93
TPM3P06753 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TPM3P06753 CDC42P4-201ENST00000510507 563 ntBASIC2.98□□□□□ -1.93
TPM3P06753 MTCO3P44-201ENST00000510977 541 ntBASIC2.98□□□□□ -1.93
TPM3P06753 SAP18P1-201ENST00000512058 390 ntBASIC2.98□□□□□ -1.93
TPM3P06753 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.98□□□□□ -1.93
TPM3P06753 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.98□□□□□ -1.93
TPM3P06753 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.98□□□□□ -1.93
TPM3P06753 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.98□□□□□ -1.93
TPM3P06753 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.98□□□□□ -1.93
TPM3P06753 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.98□□□□□ -1.93
TPM3P06753 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.98□□□□□ -1.93
TPM3P06753 AC009570.1-201ENST00000609599 745 ntBASIC2.98□□□□□ -1.93
TPM3P06753 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.98□□□□□ -1.93
TPM3P06753 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.98□□□□□ -1.93
TPM3P06753 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
TPM3P06753 AC093536.2-201ENST00000565257 1406 ntBASIC2.98□□□□□ -1.93
TPM3P06753 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TPM3P06753 AC104446.1-201ENST00000613728 1321 ntBASIC2.97□□□□□ -1.93
TPM3P06753 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TPM3P06753 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.97□□□□□ -1.93
TPM3P06753 SGO1P2-201ENST00000429458 1589 ntBASIC2.97□□□□□ -1.93
TPM3P06753 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
TPM3P06753 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TPM3P06753 SNORA51.12-201ENST00000384448 134 ntBASIC2.97□□□□□ -1.93
TPM3P06753 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
TPM3P06753 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TPM3P06753 Z86062.1-201ENST00000406773 777 ntBASIC2.97□□□□□ -1.93
TPM3P06753 RPS3AP9-201ENST00000417027 792 ntBASIC2.97□□□□□ -1.93
TPM3P06753 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.97□□□□□ -1.93
TPM3P06753 AL121578.1-201ENST00000428051 892 ntBASIC2.97□□□□□ -1.93
TPM3P06753 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.97□□□□□ -1.93
TPM3P06753 AC093156.1-201ENST00000440382 670 ntBASIC2.97□□□□□ -1.93
TPM3P06753 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.97□□□□□ -1.93
TPM3P06753 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.97□□□□□ -1.93
TPM3P06753 AC073901.1-201ENST00000462471 408 ntBASIC2.97□□□□□ -1.93
TPM3P06753 SNORA74D-201ENST00000516404 141 ntBASIC2.97□□□□□ -1.93
TPM3P06753 RNU1-104P-201ENST00000517280 175 ntBASIC2.97□□□□□ -1.93
TPM3P06753 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.97□□□□□ -1.93
TPM3P06753 MIR4635-201ENST00000583759 79 ntBASIC2.97□□□□□ -1.93
TPM3P06753 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.97□□□□□ -1.93
TPM3P06753 AL020997.2-201ENST00000602607 184 ntBASIC2.97□□□□□ -1.93
TPM3P06753 AC128687.1-201ENST00000605304 619 ntBASIC2.97□□□□□ -1.93
TPM3P06753 AL355810.1-201ENST00000614629 552 ntBASIC2.97□□□□□ -1.93
TPM3P06753 AC018926.3-201ENST00000618841 406 ntBASIC2.97□□□□□ -1.93
TPM3P06753 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TPM3P06753 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.97□□□□□ -1.93
TPM3P06753 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.97□□□□□ -1.93
TPM3P06753 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.97□□□□□ -1.93
TPM3P06753 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.96□□□□□ -1.93
TPM3P06753 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
TPM3P06753 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
TPM3P06753 RNU6-1226P-201ENST00000384317 107 ntBASIC2.96□□□□□ -1.94
TPM3P06753 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.96□□□□□ -1.94
TPM3P06753 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.96□□□□□ -1.94
TPM3P06753 AC080125.1-201ENST00000414888 684 ntBASIC2.96□□□□□ -1.94
TPM3P06753 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.96□□□□□ -1.94
TPM3P06753 MTCYBP34-201ENST00000439552 670 ntBASIC2.96□□□□□ -1.94
TPM3P06753 AC092685.1-201ENST00000447960 1243 ntBASIC2.96□□□□□ -1.94
TPM3P06753 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.96□□□□□ -1.94
TPM3P06753 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.96□□□□□ -1.94
TPM3P06753 AC104057.1-201ENST00000515547 497 ntBASIC2.96□□□□□ -1.94
TPM3P06753 OR4R1P-201ENST00000529879 463 ntBASIC2.96□□□□□ -1.94
TPM3P06753 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.96□□□□□ -1.94
TPM3P06753 CBX3P2-202ENST00000583365 535 ntBASIC2.96□□□□□ -1.94
TPM3P06753 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.96□□□□□ -1.94
TPM3P06753 AC018618.2-201ENST00000604770 446 ntBASIC2.96□□□□□ -1.94
TPM3P06753 MIR6076-201ENST00000617521 113 ntBASIC2.96□□□□□ -1.94
TPM3P06753 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
TPM3P06753 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TPM3P06753 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
TPM3P06753 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
TPM3P06753 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
TPM3P06753 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TPM3P06753 RNU6-1249P-201ENST00000363237 111 ntBASIC2.95□□□□□ -1.94
TPM3P06753 RNA5SP210-201ENST00000391034 120 ntBASIC2.95□□□□□ -1.94
TPM3P06753 AL138885.1-201ENST00000405921 675 ntBASIC2.95□□□□□ -1.94
TPM3P06753 SNORA11C-201ENST00000408532 129 ntBASIC2.95□□□□□ -1.94
TPM3P06753 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.95□□□□□ -1.94
TPM3P06753 AC114973.1-201ENST00000429057 632 ntBASIC2.95□□□□□ -1.94
TPM3P06753 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.95□□□□□ -1.94
TPM3P06753 AL031183.1-201ENST00000457667 207 ntBASIC2.95□□□□□ -1.94
TPM3P06753 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.95□□□□□ -1.94
TPM3P06753 RNU6-889P-201ENST00000517189 103 ntBASIC2.95□□□□□ -1.94
TPM3P06753 HMGB1P46-201ENST00000520062 610 ntBASIC2.95□□□□□ -1.94
TPM3P06753 OR5AK3P-201ENST00000527486 1297 ntBASIC2.95□□□□□ -1.94
TPM3P06753 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.95□□□□□ -1.94
TPM3P06753 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
TPM3P06753 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.95□□□□□ -1.94
TPM3P06753 AC017100.2-201ENST00000584628 355 ntBASIC2.95□□□□□ -1.94
TPM3P06753 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.95□□□□□ -1.94
TPM3P06753 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
TPM3P06753 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
TPM3P06753 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms