Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL359198.2-201ENST00000611836 194 ntBASIC1.31□□□□□ -2.2
APOBP04114 AC084768.2-201ENST00000622736 221 ntBASIC1.31□□□□□ -2.2
APOBP04114 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
APOBP04114 AL021368.2-201ENST00000606125 5352 ntBASIC1.3□□□□□ -2.2
APOBP04114 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
APOBP04114 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
APOBP04114 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.3□□□□□ -2.2
APOBP04114 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.3□□□□□ -2.2
APOBP04114 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.3□□□□□ -2.2
APOBP04114 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.3□□□□□ -2.2
APOBP04114 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.3□□□□□ -2.2
APOBP04114 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
APOBP04114 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
APOBP04114 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
APOBP04114 RNU6-356P-201ENST00000384140 107 ntBASIC1.3□□□□□ -2.2
APOBP04114 SNORA40.18-201ENST00000391200 128 ntBASIC1.3□□□□□ -2.2
APOBP04114 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.3□□□□□ -2.2
APOBP04114 RPL23AP44-201ENST00000482216 473 ntBASIC1.3□□□□□ -2.2
APOBP04114 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.3□□□□□ -2.2
APOBP04114 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.3□□□□□ -2.2
APOBP04114 BX664608.1-201ENST00000610519 487 ntBASIC1.3□□□□□ -2.2
APOBP04114 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.3□□□□□ -2.2
APOBP04114 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
APOBP04114 MTND4P35-201ENST00000604257 1375 ntBASIC1.3□□□□□ -2.2
APOBP04114 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.3□□□□□ -2.2
APOBP04114 AP005901.5-201ENST00000545779 1796 ntBASIC1.3□□□□□ -2.2
APOBP04114 RNU6-249P-201ENST00000363016 102 ntBASIC1.3□□□□□ -2.2
APOBP04114 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.3□□□□□ -2.2
APOBP04114 MTCO3P31-201ENST00000405526 789 ntBASIC1.3□□□□□ -2.2
APOBP04114 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.3□□□□□ -2.2
APOBP04114 AC005005.2-201ENST00000420779 380 ntBASIC1.3□□□□□ -2.2
APOBP04114 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.3□□□□□ -2.2
APOBP04114 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.3□□□□□ -2.2
APOBP04114 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.3□□□□□ -2.2
APOBP04114 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.3□□□□□ -2.2
APOBP04114 AC107398.1-201ENST00000486904 505 ntBASIC1.3□□□□□ -2.2
APOBP04114 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.3□□□□□ -2.2
APOBP04114 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.3□□□□□ -2.2
APOBP04114 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.3□□□□□ -2.2
APOBP04114 MIR4303-201ENST00000581299 66 ntBASIC1.3□□□□□ -2.2
APOBP04114 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.3□□□□□ -2.2
APOBP04114 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
APOBP04114 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
APOBP04114 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
APOBP04114 AC022336.2-201ENST00000568966 2538 ntBASIC1.3□□□□□ -2.2
APOBP04114 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
APOBP04114 U8.8-201ENST00000365399 135 ntBASIC1.3□□□□□ -2.2
APOBP04114 AC003989.2-201ENST00000440224 169 ntBASIC1.3□□□□□ -2.2
APOBP04114 RN7SL297P-201ENST00000483161 293 ntBASIC1.3□□□□□ -2.2
APOBP04114 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.3□□□□□ -2.2
APOBP04114 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.3□□□□□ -2.2
APOBP04114 NF1P5-201ENST00000588287 448 ntBASIC1.3□□□□□ -2.2
APOBP04114 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
APOBP04114 Y_RNA.783-201ENST00000613546 102 ntBASIC1.3□□□□□ -2.2
APOBP04114 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
APOBP04114 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
APOBP04114 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
APOBP04114 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
APOBP04114 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
APOBP04114 RN7SKP226-201ENST00000364912 300 ntBASIC1.29□□□□□ -2.2
APOBP04114 SNORD6-201ENST00000365444 73 ntBASIC1.29□□□□□ -2.2
APOBP04114 RNU2-68P-201ENST00000410878 191 ntBASIC1.29□□□□□ -2.2
APOBP04114 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.29□□□□□ -2.2
APOBP04114 AL353597.2-202ENST00000434901 373 ntBASIC1.29□□□□□ -2.2
APOBP04114 AC068781.1-201ENST00000488231 618 ntBASIC1.29□□□□□ -2.2
APOBP04114 RPS27P27-201ENST00000498779 255 ntBASIC1.29□□□□□ -2.2
APOBP04114 MIR6895-201ENST00000613497 78 ntBASIC1.29□□□□□ -2.2
APOBP04114 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.29□□□□□ -2.2
APOBP04114 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
APOBP04114 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC1.29□□□□□ -2.2
APOBP04114 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
APOBP04114 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
APOBP04114 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
APOBP04114 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.29□□□□□ -2.2
APOBP04114 SNORD21-201ENST00000383953 95 ntBASIC1.29□□□□□ -2.2
APOBP04114 AC234782.4-201ENST00000417646 1048 ntBASIC1.29□□□□□ -2.2
APOBP04114 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.29□□□□□ -2.2
APOBP04114 SEPT7P3-201ENST00000455017 621 ntBASIC1.29□□□□□ -2.2
APOBP04114 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.29□□□□□ -2.2
APOBP04114 RPL21P18-201ENST00000469899 480 ntBASIC1.29□□□□□ -2.2
APOBP04114 AC034244.1-201ENST00000507687 207 ntBASIC1.29□□□□□ -2.2
APOBP04114 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.29□□□□□ -2.2
APOBP04114 AC026412.2-201ENST00000512270 1075 ntBASIC1.29□□□□□ -2.2
APOBP04114 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.29□□□□□ -2.2
APOBP04114 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.29□□□□□ -2.2
APOBP04114 SNORA4-201ENST00000584302 138 ntBASIC1.29□□□□□ -2.2
APOBP04114 AC074140.1-201ENST00000621617 208 ntBASIC1.29□□□□□ -2.2
APOBP04114 AL353746.1-201ENST00000566293 6881 ntBASIC1.29□□□□□ -2.2
APOBP04114 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
APOBP04114 U8.10-201ENST00000384260 133 ntBASIC1.29□□□□□ -2.2
APOBP04114 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.29□□□□□ -2.2
APOBP04114 RNU7-95P-201ENST00000459222 64 ntBASIC1.29□□□□□ -2.2
APOBP04114 IGLV3-17-201ENST00000519099 244 ntBASIC1.29□□□□□ -2.2
APOBP04114 HMGB3P26-201ENST00000560051 582 ntBASIC1.29□□□□□ -2.2
APOBP04114 AC010546.1-201ENST00000569391 485 ntBASIC1.29□□□□□ -2.2
APOBP04114 MIR3683-201ENST00000580847 82 ntBASIC1.29□□□□□ -2.2
APOBP04114 AC092650.2-201ENST00000619984 902 ntBASIC1.29□□□□□ -2.2
APOBP04114 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
APOBP04114 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
APOBP04114 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms