Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VTNP04004 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.63□□□□□ -1.83
VTNP04004 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VTNP04004 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VTNP04004 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
VTNP04004 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VTNP04004 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VTNP04004 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
VTNP04004 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
VTNP04004 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VTNP04004 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.62□□□□□ -1.83
VTNP04004 SNORD113-6-201ENST00000363345 75 ntBASIC3.62□□□□□ -1.83
VTNP04004 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.62□□□□□ -1.83
VTNP04004 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VTNP04004 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VTNP04004 SNORA48.5-201ENST00000391143 135 ntBASIC3.62□□□□□ -1.83
VTNP04004 Z98941.1-201ENST00000407764 100 ntBASIC3.62□□□□□ -1.83
VTNP04004 AC073264.1-201ENST00000411508 416 ntBASIC3.62□□□□□ -1.83
VTNP04004 AC069218.2-201ENST00000411665 344 ntBASIC3.62□□□□□ -1.83
VTNP04004 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 PTP4A1P5-201ENST00000420305 455 ntBASIC3.62□□□□□ -1.83
VTNP04004 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.62□□□□□ -1.83
VTNP04004 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VTNP04004 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 USP9YP11-201ENST00000427537 717 ntBASIC3.62□□□□□ -1.83
VTNP04004 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 RPS6P15-201ENST00000431996 751 ntBASIC3.62□□□□□ -1.83
VTNP04004 RPL23AP33-201ENST00000442301 452 ntBASIC3.62□□□□□ -1.83
VTNP04004 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.62□□□□□ -1.83
VTNP04004 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.62□□□□□ -1.83
VTNP04004 RPL23AP67-201ENST00000465341 474 ntBASIC3.62□□□□□ -1.83
VTNP04004 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 AP000926.1-201ENST00000479573 241 ntBASIC3.62□□□□□ -1.83
VTNP04004 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.62□□□□□ -1.83
VTNP04004 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.62□□□□□ -1.83
VTNP04004 TMEM248P1-201ENST00000510579 951 ntBASIC3.62□□□□□ -1.83
VTNP04004 RNU4-60P-201ENST00000517239 135 ntBASIC3.62□□□□□ -1.83
VTNP04004 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.62□□□□□ -1.83
VTNP04004 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.62□□□□□ -1.83
VTNP04004 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.62□□□□□ -1.83
VTNP04004 ELOCP32-201ENST00000548625 324 ntBASIC3.62□□□□□ -1.83
VTNP04004 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.62□□□□□ -1.83
VTNP04004 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 OR4K7P-201ENST00000580232 945 ntBASIC3.62□□□□□ -1.83
VTNP04004 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.62□□□□□ -1.83
VTNP04004 AC007566.2-201ENST00000603642 413 ntBASIC3.62□□□□□ -1.83
VTNP04004 AL133507.1-201ENST00000605269 557 ntBASIC3.62□□□□□ -1.83
VTNP04004 AL139418.1-201ENST00000613613 177 ntBASIC3.62□□□□□ -1.83
VTNP04004 AC022079.1-201ENST00000621546 602 ntBASIC3.62□□□□□ -1.83
VTNP04004 AC092184.1-201ENST00000625042 715 ntBASIC3.62□□□□□ -1.83
VTNP04004 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VTNP04004 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VTNP04004 PNPT1P2-201ENST00000456768 2050 ntBASIC3.62□□□□□ -1.83
VTNP04004 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.62□□□□□ -1.83
VTNP04004 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VTNP04004 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VTNP04004 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VTNP04004 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.61□□□□□ -1.83
VTNP04004 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.61□□□□□ -1.83
VTNP04004 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VTNP04004 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
VTNP04004 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VTNP04004 Y_RNA.311-201ENST00000365068 96 ntBASIC3.61□□□□□ -1.83
VTNP04004 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VTNP04004 RNU6-657P-201ENST00000383904 107 ntBASIC3.61□□□□□ -1.83
VTNP04004 RNU6-921P-201ENST00000384361 107 ntBASIC3.61□□□□□ -1.83
VTNP04004 NDUFB4P4-201ENST00000404822 243 ntBASIC3.61□□□□□ -1.83
VTNP04004 AL138878.1-201ENST00000405131 347 ntBASIC3.61□□□□□ -1.83
VTNP04004 LUZP4P1-201ENST00000415420 344 ntBASIC3.61□□□□□ -1.83
VTNP04004 AL356968.1-201ENST00000416622 474 ntBASIC3.61□□□□□ -1.83
VTNP04004 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.61□□□□□ -1.83
VTNP04004 AL353678.1-201ENST00000422735 741 ntBASIC3.61□□□□□ -1.83
VTNP04004 AC011233.1-201ENST00000422812 283 ntBASIC3.61□□□□□ -1.83
VTNP04004 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.61□□□□□ -1.83
VTNP04004 AL158071.1-201ENST00000430315 461 ntBASIC3.61□□□□□ -1.83
VTNP04004 RPS6P12-201ENST00000432491 726 ntBASIC3.61□□□□□ -1.83
VTNP04004 B3GNT2P1-201ENST00000434960 952 ntBASIC3.61□□□□□ -1.83
VTNP04004 MTCYBP34-201ENST00000439552 670 ntBASIC3.61□□□□□ -1.83
VTNP04004 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.61□□□□□ -1.83
VTNP04004 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VTNP04004 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.61□□□□□ -1.83
VTNP04004 RPS4XP2-201ENST00000458402 793 ntBASIC3.61□□□□□ -1.83
VTNP04004 ACTG1P13-201ENST00000486987 1043 ntBASIC3.61□□□□□ -1.83
VTNP04004 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.61□□□□□ -1.83
VTNP04004 AC010486.2-201ENST00000505572 483 ntBASIC3.61□□□□□ -1.83
VTNP04004 AC107934.2-201ENST00000518653 310 ntBASIC3.61□□□□□ -1.83
VTNP04004 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.61□□□□□ -1.83
VTNP04004 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.61□□□□□ -1.83
VTNP04004 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.61□□□□□ -1.83
VTNP04004 VN1R82P-201ENST00000601481 356 ntBASIC3.61□□□□□ -1.83
VTNP04004 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.61□□□□□ -1.83
VTNP04004 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms