Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.28□□□□□ -1.88
MT-ND1P03886 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MT-ND1P03886 RN7SL703P-201ENST00000578485 302 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.28□□□□□ -1.88
MT-ND1P03886 NIFKP6-201ENST00000598115 845 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.28□□□□□ -1.88
MT-ND1P03886 BX323046.1-201ENST00000610145 535 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 MIR8058-201ENST00000615737 89 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 AC069209.1-201ENST00000619282 651 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.28□□□□□ -1.88
MT-ND1P03886 AC120349.2-201ENST00000625002 298 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.28□□□□□ -1.88
MT-ND1P03886 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MT-ND1P03886 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.28□□□□□ -1.88
MT-ND1P03886 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MT-ND1P03886 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
MT-ND1P03886 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MT-ND1P03886 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
MT-ND1P03886 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MT-ND1P03886 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.28□□□□□ -1.88
MT-ND1P03886 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MT-ND1P03886 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
MT-ND1P03886 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.27□□□□□ -1.89
MT-ND1P03886 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MT-ND1P03886 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MT-ND1P03886 ZNF542P-204ENST00000482727 1305 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.27□□□□□ -1.89
MT-ND1P03886 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MT-ND1P03886 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MT-ND1P03886 AL049780.3-201ENST00000624612 1583 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 RNU1-75P-201ENST00000347264 129 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 RNU6-621P-201ENST00000364752 109 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 MIR591-201ENST00000385290 95 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 RN7SKP156-201ENST00000410308 342 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 RNA5SP31-201ENST00000411144 127 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 RN7SKP53-201ENST00000411337 315 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 RNA5SP107-201ENST00000411358 122 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AC107081.1-201ENST00000414975 361 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
MT-ND1P03886 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.27□□□□□ -1.89
MT-ND1P03886 DBIP2-201ENST00000419076 262 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AC099677.1-201ENST00000420575 175 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AP000907.1-201ENST00000428428 510 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.27□□□□□ -1.89
MT-ND1P03886 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.27□□□□□ -1.89
MT-ND1P03886 SLC31A1P1-201ENST00000451221 567 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 HMGN1P18-201ENST00000457642 277 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.27□□□□□ -1.89
MT-ND1P03886 U3.44-201ENST00000458938 192 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 snoU109.4-201ENST00000458953 143 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 RN7SL385P-201ENST00000468873 276 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 RPL7P38-201ENST00000488396 739 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 OR4G11P-201ENST00000492842 939 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 SETP14-201ENST00000497538 873 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
MT-ND1P03886 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.27□□□□□ -1.89
MT-ND1P03886 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.27□□□□□ -1.89
MT-ND1P03886 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.27□□□□□ -1.89
MT-ND1P03886 OR4P1P-201ENST00000530808 1136 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.27□□□□□ -1.89
MT-ND1P03886 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.27□□□□□ -1.89
MT-ND1P03886 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MT-ND1P03886 EEF1B2P4-201ENST00000551398 348 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AC126177.3-201ENST00000551839 688 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.27□□□□□ -1.89
MT-ND1P03886 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.27□□□□□ -1.89
MT-ND1P03886 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.27□□□□□ -1.89
MT-ND1P03886 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.27□□□□□ -1.89
MT-ND1P03886 AC145350.1-201ENST00000567426 208 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.27□□□□□ -1.89
MT-ND1P03886 OR4K7P-201ENST00000580232 945 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.27□□□□□ -1.89
MT-ND1P03886 AP001029.3-201ENST00000588063 596 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.27□□□□□ -1.89
MT-ND1P03886 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.27□□□□□ -1.89
MT-ND1P03886 AC025811.1-201ENST00000604312 472 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AL451086.1-201ENST00000605596 223 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AC055876.5-201ENST00000605667 259 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AL136295.6-201ENST00000610486 658 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.27□□□□□ -1.89
MT-ND1P03886 Z99129.2-201ENST00000619967 314 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AL360181.4-201ENST00000621752 134 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 AF117829.1-206ENST00000621883 3802 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.27□□□□□ -1.89
MT-ND1P03886 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MT-ND1P03886 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MT-ND1P03886 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MT-ND1P03886 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MT-ND1P03886 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
MT-ND1P03886 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
MT-ND1P03886 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
MT-ND1P03886 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
MT-ND1P03886 AC010733.2-201ENST00000589496 5702 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 FRG1CP-201ENST00000358464 769 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 RNU6-216P-201ENST00000363282 104 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 Y_RNA.311-201ENST00000365068 96 ntBASIC3.26□□□□□ -1.89
MT-ND1P03886 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms