Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL1A1P02452 RNU1-51P-201ENST00000365345 176 ntBASIC2.73□□□□□ -1.97
COL1A1P02452 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL1A1P02452 SNORA64-201ENST00000384674 134 ntBASIC2.73□□□□□ -1.97
COL1A1P02452 MIR221-201ENST00000385135 110 ntBASIC2.73□□□□□ -1.97
COL1A1P02452 HMGB1P11-201ENST00000413899 637 ntBASIC2.73□□□□□ -1.97
COL1A1P02452 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.73□□□□□ -1.97
COL1A1P02452 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.73□□□□□ -1.97
COL1A1P02452 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL1A1P02452 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.73□□□□□ -1.97
COL1A1P02452 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.73□□□□□ -1.97
COL1A1P02452 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.73□□□□□ -1.97
COL1A1P02452 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.73□□□□□ -1.97
COL1A1P02452 AC025125.1-201ENST00000624743 1922 ntBASIC2.73□□□□□ -1.97
COL1A1P02452 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL1A1P02452 AL118496.1-201ENST00000440201 1812 ntBASIC2.73□□□□□ -1.97
COL1A1P02452 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
COL1A1P02452 SEPT7P7-201ENST00000420492 1301 ntBASIC2.73□□□□□ -1.97
COL1A1P02452 AL034374.1-201ENST00000406329 351 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.72□□□□□ -1.97
COL1A1P02452 AC048351.1-201ENST00000420064 602 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 MTCO3P11-201ENST00000455103 774 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 RPL23AP70-201ENST00000483361 460 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.72□□□□□ -1.97
COL1A1P02452 AC023050.1-201ENST00000498198 304 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 AC078814.3-201ENST00000553036 491 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.72□□□□□ -1.97
COL1A1P02452 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.72□□□□□ -1.97
COL1A1P02452 AC105137.2-201ENST00000569073 466 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 AC006270.2-201ENST00000578523 652 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 MIR3670-2-201ENST00000582974 65 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 MIR3670-1-201ENST00000584160 65 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 MIR3670-3-201ENST00000584855 65 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.72□□□□□ -1.97
COL1A1P02452 AC007687.1-201ENST00000602704 304 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 AC019131.2-201ENST00000609071 870 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 MIR3670-4-201ENST00000612260 65 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.72□□□□□ -1.97
COL1A1P02452 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL1A1P02452 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.72□□□□□ -1.97
COL1A1P02452 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.71□□□□□ -1.97
COL1A1P02452 AL512646.1-201ENST00000269395 1077 ntBASIC2.71□□□□□ -1.97
COL1A1P02452 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
COL1A1P02452 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
COL1A1P02452 AC007390.1-201ENST00000415722 356 ntBASIC2.71□□□□□ -1.97
COL1A1P02452 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.71□□□□□ -1.97
COL1A1P02452 MTATP6P11-201ENST00000428071 670 ntBASIC2.71□□□□□ -1.97
COL1A1P02452 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
COL1A1P02452 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.71□□□□□ -1.97
COL1A1P02452 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.71□□□□□ -1.97
COL1A1P02452 HIGD1AP10-201ENST00000527837 282 ntBASIC2.71□□□□□ -1.97
COL1A1P02452 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
COL1A1P02452 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.71□□□□□ -1.97
COL1A1P02452 AC010297.1-201ENST00000623948 149 ntBASIC2.71□□□□□ -1.97
COL1A1P02452 CYP3A51P-201ENST00000633513 256 ntBASIC2.71□□□□□ -1.97
COL1A1P02452 AC008432.1-201ENST00000615912 1320 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.71□□□□□ -1.98
COL1A1P02452 AC010733.2-201ENST00000589496 5702 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.71□□□□□ -1.98
COL1A1P02452 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL1A1P02452 Y_RNA.796-201ENST00000364268 102 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 Y_RNA.799-201ENST00000364992 102 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.71□□□□□ -1.98
COL1A1P02452 Z98742.2-201ENST00000431564 187 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 AC010881.1-201ENST00000433830 235 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 YWHAZP7-201ENST00000436906 631 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.71□□□□□ -1.98
COL1A1P02452 NPM1P49-201ENST00000448027 714 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 HMGB1P15-201ENST00000453854 435 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 AC092451.1-201ENST00000480211 153 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.71□□□□□ -1.98
COL1A1P02452 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL1A1P02452 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.71□□□□□ -1.98
COL1A1P02452 MTCO1P30-201ENST00000515244 580 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.71□□□□□ -1.98
COL1A1P02452 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.71□□□□□ -1.98
COL1A1P02452 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.71□□□□□ -1.98
COL1A1P02452 MTCYBP28-201ENST00000566728 1132 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 AL627309.6-201ENST00000606857 840 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 AC104237.2-201ENST00000612456 443 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 VN1R9P-201ENST00000614184 867 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 AL589935.2-201ENST00000616471 1231 ntBASIC2.71□□□□□ -1.98
COL1A1P02452 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.71□□□□□ -1.98
COL1A1P02452 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.71□□□□□ -1.98
COL1A1P02452 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.71□□□□□ -1.98
COL1A1P02452 AC000367.1-201ENST00000452711 1766 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 AP001148.1-201ENST00000624124 2359 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 RNU2-37P-201ENST00000410695 177 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.7□□□□□ -1.98
COL1A1P02452 AC009414.1-201ENST00000427200 443 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 AL138799.3-201ENST00000438968 350 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.7□□□□□ -1.98
COL1A1P02452 RPL23AP42-201ENST00000471152 471 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 TRBV1-201ENST00000476502 284 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 TBCAP3-201ENST00000512475 312 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.7□□□□□ -1.98
COL1A1P02452 AC004486.1-201ENST00000546846 233 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.7□□□□□ -1.98
COL1A1P02452 AC012182.1-201ENST00000570133 895 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 OR4K7P-201ENST00000580232 945 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms