Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RPL23AP11-201ENST00000475260 469 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 RN7SL499P-201ENST00000481141 276 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC096751.1-202ENST00000502691 1067 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC006390.1-201ENST00000508068 283 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC026412.2-201ENST00000512270 1075 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 MTCO2P32-201ENST00000514865 403 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 RN7SKP18-201ENST00000516005 275 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC023632.4-201ENST00000517783 191 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC106785.1-201ENST00000565935 262 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC034268.2-201ENST00000571784 482 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC067852.3-201ENST00000589177 561 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AL133393.1-201ENST00000603277 287 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC006023.2-201ENST00000609916 167 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC005332.6-201ENST00000613178 446 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC092650.2-201ENST00000619984 902 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AL356321.1-201ENST00000621360 228 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AL049780.3-201ENST00000624612 1583 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 FAM35CP-201ENST00000554755 2470 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AL365440.1-201ENST00000436135 2167 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 RNU6-216P-201ENST00000363282 104 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 RNU5D-1-201ENST00000363299 116 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 Y_RNA.126-201ENST00000363382 111 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 RNU5E-10P-201ENST00000363506 118 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 DEFB109C-201ENST00000382575 264 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 DEFB109B-201ENST00000382656 264 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 RNU2-15P-201ENST00000410692 191 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 OR1AA1P-201ENST00000419597 916 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC092017.2-201ENST00000427600 362 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AL035246.1-201ENST00000433554 1255 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 MTND4LP10-201ENST00000435146 291 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 SETP8-201ENST00000435341 628 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 USP9YP22-201ENST00000438971 294 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 HSPE1P28-201ENST00000443139 211 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 GSTA11P-201ENST00000452866 669 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 USP9YP34-201ENST00000453983 808 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 PNPLA4P1-201ENST00000458328 305 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 RPS27AP9-201ENST00000477681 438 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 ACTR3P3-201ENST00000480448 893 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC069528.1-202ENST00000482888 637 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 RPL7P23-201ENST00000493874 747 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC113420.1-201ENST00000507903 571 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 MTCYBP16-201ENST00000509187 1129 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC104986.1-201ENST00000517978 436 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC125611.1-201ENST00000549563 229 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 MIR4474-201ENST00000579189 78 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 VN1R83P-201ENST00000595685 445 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AL035411.2-201ENST00000604022 421 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC055876.5-201ENST00000605667 259 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC092354.2-201ENST00000607786 514 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 MIR6798-201ENST00000612887 67 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AL109620.1-201ENST00000618738 1197 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 U4.6-201ENST00000621618 127 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
HLA-DQA1P01909 AC120349.2-201ENST00000625002 298 ntBASIC2.42□□□□□ -2.02
HLA-DQA1P01909 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms