Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CKS1BP5-201ENST00000434172 273 ntBASIC2.3□□□□□ -2.04
TNFP01375 RPL23AP58-201ENST00000440453 469 ntBASIC2.3□□□□□ -2.04
TNFP01375 UBBP3-201ENST00000445497 241 ntBASIC2.3□□□□□ -2.04
TNFP01375 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TNFP01375 AP002371.1-201ENST00000463604 433 ntBASIC2.3□□□□□ -2.04
TNFP01375 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TNFP01375 RPL23AP49-201ENST00000492925 468 ntBASIC2.3□□□□□ -2.04
TNFP01375 AIG1P1-201ENST00000503376 148 ntBASIC2.3□□□□□ -2.04
TNFP01375 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TNFP01375 MTCYBP37-201ENST00000510642 1133 ntBASIC2.3□□□□□ -2.04
TNFP01375 HMGB1P41-201ENST00000520234 440 ntBASIC2.3□□□□□ -2.04
TNFP01375 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.3□□□□□ -2.04
TNFP01375 AC004486.1-201ENST00000546846 233 ntBASIC2.3□□□□□ -2.04
TNFP01375 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.3□□□□□ -2.04
TNFP01375 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TNFP01375 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.3□□□□□ -2.04
TNFP01375 SNRPGP15-201ENST00000600149 222 ntBASIC2.3□□□□□ -2.04
TNFP01375 AC136601.2-201ENST00000604356 474 ntBASIC2.3□□□□□ -2.04
TNFP01375 AL391834.1-201ENST00000609609 560 ntBASIC2.3□□□□□ -2.04
TNFP01375 AC091046.2-201ENST00000620775 665 ntBASIC2.3□□□□□ -2.04
TNFP01375 AP000676.4-201ENST00000624659 623 ntBASIC2.3□□□□□ -2.04
TNFP01375 AC079228.1-201ENST00000624774 1049 ntBASIC2.3□□□□□ -2.04
TNFP01375 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.3□□□□□ -2.04
TNFP01375 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.3□□□□□ -2.04
TNFP01375 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.3□□□□□ -2.04
TNFP01375 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TNFP01375 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.29□□□□□ -2.04
TNFP01375 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TNFP01375 RNU1-109P-201ENST00000383960 147 ntBASIC2.29□□□□□ -2.04
TNFP01375 BTF3P7-201ENST00000407097 488 ntBASIC2.29□□□□□ -2.04
TNFP01375 MTCYBP7-201ENST00000419540 1134 ntBASIC2.29□□□□□ -2.04
TNFP01375 AL031736.2-201ENST00000426573 787 ntBASIC2.29□□□□□ -2.04
TNFP01375 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.29□□□□□ -2.04
TNFP01375 RPS24P8-201ENST00000431490 402 ntBASIC2.29□□□□□ -2.04
TNFP01375 AL139415.2-201ENST00000431968 163 ntBASIC2.29□□□□□ -2.04
TNFP01375 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
TNFP01375 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
TNFP01375 ELOCP11-201ENST00000436690 332 ntBASIC2.29□□□□□ -2.04
TNFP01375 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.29□□□□□ -2.04
TNFP01375 ELOCP16-201ENST00000444494 332 ntBASIC2.29□□□□□ -2.04
TNFP01375 SNORA31.1-201ENST00000515993 133 ntBASIC2.29□□□□□ -2.04
TNFP01375 SNORA31.5-201ENST00000516190 133 ntBASIC2.29□□□□□ -2.04
TNFP01375 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.29□□□□□ -2.04
TNFP01375 MTCYBP41-201ENST00000528913 1123 ntBASIC2.29□□□□□ -2.04
TNFP01375 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.29□□□□□ -2.04
TNFP01375 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.29□□□□□ -2.04
TNFP01375 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.29□□□□□ -2.04
TNFP01375 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.29□□□□□ -2.04
TNFP01375 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
TNFP01375 AC105137.2-201ENST00000569073 466 ntBASIC2.29□□□□□ -2.04
TNFP01375 MIR3670-2-201ENST00000582974 65 ntBASIC2.29□□□□□ -2.04
TNFP01375 MIR3670-1-201ENST00000584160 65 ntBASIC2.29□□□□□ -2.04
TNFP01375 SNORD84-203ENST00000584275 78 ntBASIC2.29□□□□□ -2.04
TNFP01375 MIR3670-3-201ENST00000584855 65 ntBASIC2.29□□□□□ -2.04
TNFP01375 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.29□□□□□ -2.04
TNFP01375 DUXAP4-201ENST00000603046 613 ntBASIC2.29□□□□□ -2.04
TNFP01375 AC067747.1-201ENST00000608026 250 ntBASIC2.29□□□□□ -2.04
TNFP01375 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
TNFP01375 MIR3670-4-201ENST00000612260 65 ntBASIC2.29□□□□□ -2.04
TNFP01375 AC068831.7-201ENST00000616954 363 ntBASIC2.29□□□□□ -2.04
TNFP01375 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.29□□□□□ -2.04
TNFP01375 MIR6873-201ENST00000622788 63 ntBASIC2.29□□□□□ -2.04
TNFP01375 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.29□□□□□ -2.04
TNFP01375 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.29□□□□□ -2.04
TNFP01375 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TNFP01375 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.29□□□□□ -2.04
TNFP01375 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
TNFP01375 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TNFP01375 RPS3AP26-201ENST00000398259 784 ntBASIC2.28□□□□□ -2.04
TNFP01375 AL139095.1-201ENST00000404326 391 ntBASIC2.28□□□□□ -2.04
TNFP01375 RNA5SP492-201ENST00000411330 114 ntBASIC2.28□□□□□ -2.04
TNFP01375 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.28□□□□□ -2.04
TNFP01375 NPM1P11-201ENST00000417106 855 ntBASIC2.28□□□□□ -2.04
TNFP01375 RPL21P66-201ENST00000426566 466 ntBASIC2.28□□□□□ -2.04
TNFP01375 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.28□□□□□ -2.04
TNFP01375 FAM103A2P-201ENST00000444122 354 ntBASIC2.28□□□□□ -2.04
TNFP01375 ARL5AP2-201ENST00000444698 533 ntBASIC2.28□□□□□ -2.04
TNFP01375 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.28□□□□□ -2.04
TNFP01375 LARP7P4-201ENST00000481075 878 ntBASIC2.28□□□□□ -2.04
TNFP01375 RPL21P131-201ENST00000497298 483 ntBASIC2.28□□□□□ -2.04
TNFP01375 XKRY-201ENST00000510392 1100 ntBASIC2.28□□□□□ -2.04
TNFP01375 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.28□□□□□ -2.04
TNFP01375 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TNFP01375 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.28□□□□□ -2.04
TNFP01375 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.28□□□□□ -2.04
TNFP01375 AC090616.5-202ENST00000582111 297 ntBASIC2.28□□□□□ -2.04
TNFP01375 MIR5007-201ENST00000583098 95 ntBASIC2.28□□□□□ -2.04
TNFP01375 AC060766.3-201ENST00000591442 263 ntBASIC2.28□□□□□ -2.04
TNFP01375 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.28□□□□□ -2.04
TNFP01375 AP000787.2-201ENST00000604432 568 ntBASIC2.28□□□□□ -2.04
TNFP01375 AC113194.1-201ENST00000606037 500 ntBASIC2.28□□□□□ -2.04
TNFP01375 AL592494.3-201ENST00000609485 464 ntBASIC2.28□□□□□ -2.04
TNFP01375 MAPK10-322ENST00000641485 4530 ntBASIC2.28□□□□□ -2.04
TNFP01375 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TNFP01375 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TNFP01375 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.27□□□□□ -2.05
TNFP01375 SNORD56.5-201ENST00000364281 72 ntBASIC2.27□□□□□ -2.05
TNFP01375 MIR320B1-201ENST00000390209 79 ntBASIC2.27□□□□□ -2.05
TNFP01375 RN7SKP223-201ENST00000410582 62 ntBASIC2.27□□□□□ -2.05
TNFP01375 AC005189.1-201ENST00000431286 310 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms