Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 SETP8-201ENST00000435341 628 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.38□□□□□ -2.03
CPSF4O95639 RPL21P2-201ENST00000440049 481 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 AC092170.1-201ENST00000440211 356 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.38□□□□□ -2.03
CPSF4O95639 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.38□□□□□ -2.03
CPSF4O95639 RAB11AP1-201ENST00000442978 646 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CPSF4O95639 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.38□□□□□ -2.03
CPSF4O95639 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.38□□□□□ -2.03
CPSF4O95639 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.38□□□□□ -2.03
CPSF4O95639 SNORD109B-201ENST00000458961 67 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 SNORD109A-201ENST00000459128 67 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 AC146507.1-201ENST00000468335 354 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.38□□□□□ -2.03
CPSF4O95639 RPS27P23-201ENST00000487608 251 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CPSF4O95639 RPL23AP55-201ENST00000498163 452 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.38□□□□□ -2.03
CPSF4O95639 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CPSF4O95639 HIGD1AP3-201ENST00000515857 278 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 RNU6-202P-201ENST00000515998 96 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 RN7SKP244-201ENST00000516513 307 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.38□□□□□ -2.03
CPSF4O95639 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.38□□□□□ -2.03
CPSF4O95639 AC243972.3-201ENST00000539655 198 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 CENPUP2-201ENST00000555897 1186 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 GTF2IP8-201ENST00000560687 584 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 AC095057.3-201ENST00000567102 1157 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.38□□□□□ -2.03
CPSF4O95639 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.38□□□□□ -2.03
CPSF4O95639 BNIP3P4-201ENST00000604946 565 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 AL451074.6-201ENST00000608512 729 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 AC021851.1-201ENST00000608537 1082 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 MIR8084-201ENST00000614105 89 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 MIR4496-201ENST00000635896 61 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CPSF4O95639 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CPSF4O95639 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CPSF4O95639 SAGE4P-201ENST00000442271 3381 ntBASIC2.38□□□□□ -2.03
CPSF4O95639 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.38□□□□□ -2.03
CPSF4O95639 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.37□□□□□ -2.03
CPSF4O95639 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CPSF4O95639 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CPSF4O95639 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CPSF4O95639 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CPSF4O95639 RNU6-859P-201ENST00000362728 107 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.37□□□□□ -2.03
CPSF4O95639 SNORA9-201ENST00000384215 133 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 MIR607-201ENST00000385241 96 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 RNU2-52P-201ENST00000410680 190 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 MTCO2P17-201ENST00000424336 677 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.37□□□□□ -2.03
CPSF4O95639 MTATP6P11-201ENST00000428071 670 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 PSMA2P3-201ENST00000429685 675 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.37□□□□□ -2.03
CPSF4O95639 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.37□□□□□ -2.03
CPSF4O95639 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.37□□□□□ -2.03
CPSF4O95639 RPS12P2-201ENST00000439728 269 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 RPL23AP33-201ENST00000442301 452 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 Z77249.1-201ENST00000444622 1175 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.37□□□□□ -2.03
CPSF4O95639 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.37□□□□□ -2.03
CPSF4O95639 BX248409.1-201ENST00000455497 255 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 AC078857.1-201ENST00000469870 667 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 RPS26P21-201ENST00000475397 348 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CPSF4O95639 SLC25A15P5-201ENST00000508033 253 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 TMEM248P1-201ENST00000510579 951 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 AC027338.1-201ENST00000514840 825 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.37□□□□□ -2.03
CPSF4O95639 AP003168.1-201ENST00000530091 307 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.37□□□□□ -2.03
CPSF4O95639 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CPSF4O95639 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CPSF4O95639 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CPSF4O95639 AP003717.3-201ENST00000544832 1180 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.37□□□□□ -2.03
CPSF4O95639 OR6C73P-201ENST00000546432 358 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.37□□□□□ -2.03
CPSF4O95639 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.37□□□□□ -2.03
CPSF4O95639 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.37□□□□□ -2.03
CPSF4O95639 AC017100.2-201ENST00000584628 355 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 RN7SL622P-201ENST00000585292 275 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 ELOCP29-201ENST00000588193 334 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.37□□□□□ -2.03
CPSF4O95639 AC112503.2-201ENST00000609005 552 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 AL512506.1-201ENST00000613918 449 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CPSF4O95639 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.37□□□□□ -2.03
CPSF4O95639 AC020923.1-201ENST00000624021 917 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 AL356094.1-201ENST00000624663 1212 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.37□□□□□ -2.03
CPSF4O95639 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.37□□□□□ -2.03
CPSF4O95639 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
CPSF4O95639 AC116096.1-201ENST00000566804 2314 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 API5P2-201ENST00000397055 1498 ntBASIC2.37□□□□□ -2.03
CPSF4O95639 AL355596.1-201ENST00000565399 3996 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms