Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CDKL5O76039 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDKL5O76039 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDKL5O76039 AP002001.2-201ENST00000529025 1469 ntBASIC4.69□□□□□ -1.66
CDKL5O76039 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDKL5O76039 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.68□□□□□ -1.66
CDKL5O76039 MAPK10-373ENST00000641983 6772 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 RPS3AP36-201ENST00000398190 775 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.68□□□□□ -1.66
CDKL5O76039 RNA5SP239-201ENST00000410218 129 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.68□□□□□ -1.66
CDKL5O76039 AC016397.1-201ENST00000412463 242 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL5O76039 MTATP6P27-201ENST00000416987 621 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL5O76039 AC048351.1-201ENST00000420064 602 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL5O76039 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.68□□□□□ -1.66
CDKL5O76039 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL5O76039 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL5O76039 MTND4LP10-201ENST00000435146 291 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL5O76039 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL5O76039 AC092427.1-201ENST00000439177 601 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.68□□□□□ -1.66
CDKL5O76039 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL5O76039 RPL39P6-201ENST00000448289 150 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 MTND5P20-201ENST00000448677 143 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 PSPHP1-201ENST00000450062 261 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 AC239809.1-201ENST00000450470 217 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL5O76039 AL645939.1-201ENST00000453429 797 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 AC097493.1-201ENST00000463958 372 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 AC010618.1-201ENST00000469924 477 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.68□□□□□ -1.66
CDKL5O76039 AC069439.1-201ENST00000494739 167 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 RPL31P61-201ENST00000496160 376 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CDKL5O76039 AC117522.1-201ENST00000509821 380 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 SNORA31.9-201ENST00000516429 84 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 Y_RNA.702-201ENST00000516843 96 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.68□□□□□ -1.66
CDKL5O76039 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDKL5O76039 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.68□□□□□ -1.66
CDKL5O76039 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.68□□□□□ -1.66
CDKL5O76039 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.68□□□□□ -1.66
CDKL5O76039 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.68□□□□□ -1.66
CDKL5O76039 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.68□□□□□ -1.66
CDKL5O76039 AC112191.3-201ENST00000604371 277 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 uc_338.32-201ENST00000615087 172 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 AP001506.1-201ENST00000615444 211 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 AC006338.1-201ENST00000618453 749 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 AL139089.1-201ENST00000620372 975 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 AC103858.2-201ENST00000621471 543 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 MIR4727-201ENST00000622232 55 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 DUXAP9-208ENST00000622815 614 ntBASIC4.68□□□□□ -1.66
CDKL5O76039 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDKL5O76039 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDKL5O76039 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDKL5O76039 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.68□□□□□ -1.66
CDKL5O76039 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.68□□□□□ -1.66
CDKL5O76039 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.67□□□□□ -1.66
CDKL5O76039 AL592437.2-201ENST00000421655 2434 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CDKL5O76039 PHKBP1-201ENST00000450951 1951 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.67□□□□□ -1.66
CDKL5O76039 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDKL5O76039 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDKL5O76039 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDKL5O76039 Y_RNA.9-201ENST00000362354 101 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 SNORA72.1-201ENST00000363485 129 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 RNU6-777P-201ENST00000364265 104 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.67□□□□□ -1.66
CDKL5O76039 AL590002.1-201ENST00000406554 418 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 MIR1183-201ENST00000408856 89 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 AC073264.1-201ENST00000411508 416 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 AC234782.4-201ENST00000417646 1048 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 C1DP2-201ENST00000418167 426 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.67□□□□□ -1.66
CDKL5O76039 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.67□□□□□ -1.66
CDKL5O76039 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.67□□□□□ -1.66
CDKL5O76039 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.67□□□□□ -1.66
CDKL5O76039 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDKL5O76039 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.67□□□□□ -1.66
CDKL5O76039 AC112653.1-201ENST00000443851 386 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.67□□□□□ -1.66
CDKL5O76039 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.67□□□□□ -1.66
CDKL5O76039 RN7SL860P-201ENST00000473738 223 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.67□□□□□ -1.66
CDKL5O76039 AC139783.2-201ENST00000504847 1145 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CDKL5O76039 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CDKL5O76039 AC108078.1-201ENST00000508073 725 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.67□□□□□ -1.66
CDKL5O76039 AC108064.1-201ENST00000513791 460 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 AC010342.1-201ENST00000514047 877 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 MTCO2P4-201ENST00000517968 247 ntBASIC4.67□□□□□ -1.66
CDKL5O76039 AP001646.1-201ENST00000527936 915 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms