Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SNRNP200O75643 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SNRNP200O75643 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
SNRNP200O75643 RNU6-167P-201ENST00000384292 106 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 AL024474.1-201ENST00000404655 591 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 RPL23AP47-201ENST00000408017 460 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.12□□□□□ -2.07
SNRNP200O75643 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.12□□□□□ -2.07
SNRNP200O75643 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.12□□□□□ -2.07
SNRNP200O75643 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.12□□□□□ -2.07
SNRNP200O75643 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.12□□□□□ -2.07
SNRNP200O75643 RPS27AP9-201ENST00000477681 438 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 RPL23AP49-201ENST00000492925 468 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SNRNP200O75643 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.12□□□□□ -2.07
SNRNP200O75643 AP001646.1-201ENST00000527936 915 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.12□□□□□ -2.07
SNRNP200O75643 MIR1273D-201ENST00000577266 86 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 MIR4513-201ENST00000581077 86 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 AL356575.1-201ENST00000603008 283 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.12□□□□□ -2.07
SNRNP200O75643 AC090617.7-201ENST00000623952 126 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SNRNP200O75643 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SNRNP200O75643 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SNRNP200O75643 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.12□□□□□ -2.07
SNRNP200O75643 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.12□□□□□ -2.07
SNRNP200O75643 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.12□□□□□ -2.07
SNRNP200O75643 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.12□□□□□ -2.07
SNRNP200O75643 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SNRNP200O75643 RNA5SP456-201ENST00000364002 114 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 RPS3AP26-201ENST00000398259 784 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 VN1R51P-201ENST00000411675 945 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 AL139413.1-201ENST00000421309 217 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.12□□□□□ -2.07
SNRNP200O75643 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2.12□□□□□ -2.07
SNRNP200O75643 AL590103.1-201ENST00000434488 307 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 RPS15AP28-201ENST00000435088 386 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 AC129850.1-201ENST00000436203 508 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.12□□□□□ -2.07
SNRNP200O75643 AC104308.1-201ENST00000454621 333 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 RPL21P103-201ENST00000479921 488 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.12□□□□□ -2.07
SNRNP200O75643 RNA5SP281-201ENST00000516504 135 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 RNU6-56P-201ENST00000516986 93 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.12□□□□□ -2.07
SNRNP200O75643 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.12□□□□□ -2.07
SNRNP200O75643 AC004486.1-201ENST00000546846 233 ntBASIC2.12□□□□□ -2.07
SNRNP200O75643 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.12□□□□□ -2.07
SNRNP200O75643 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.11□□□□□ -2.07
SNRNP200O75643 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNRNP200O75643 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SNRNP200O75643 MTND5P3-201ENST00000438536 1800 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 SNORA51.2-201ENST00000364595 132 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 MIR607-201ENST00000385241 96 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 HIGD1AP2-201ENST00000446367 280 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SNRNP200O75643 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SNRNP200O75643 ATG10-AS1-201ENST00000504846 648 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
SNRNP200O75643 AC104090.1-201ENST00000506341 1171 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 AC008549.1-201ENST00000512900 643 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 RNA5SP468-201ENST00000516782 93 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 RNU4-60P-201ENST00000517239 135 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.11□□□□□ -2.07
SNRNP200O75643 AP000916.1-201ENST00000533869 835 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 RPL23AP88-201ENST00000605759 454 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 AP001521.1-201ENST00000609150 300 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 VN1R7P-201ENST00000619242 903 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.11□□□□□ -2.07
SNRNP200O75643 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNRNP200O75643 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.11□□□□□ -2.07
SNRNP200O75643 MIR153-1-201ENST00000384914 90 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 RNA5SP492-201ENST00000411330 114 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.11□□□□□ -2.07
SNRNP200O75643 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.11□□□□□ -2.07
SNRNP200O75643 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.11□□□□□ -2.07
SNRNP200O75643 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SNRNP200O75643 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.11□□□□□ -2.07
SNRNP200O75643 AC009961.3-201ENST00000449832 765 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 RPL37P6-202ENST00000464216 403 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
SNRNP200O75643 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.11□□□□□ -2.07
SNRNP200O75643 MIR4435-1-201ENST00000582552 80 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 SNRPGP15-201ENST00000600149 222 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.11□□□□□ -2.07
SNRNP200O75643 AL592494.3-201ENST00000609485 464 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SNRNP200O75643 AC005858.4-201ENST00000623191 700 ntBASIC2.11□□□□□ -2.07
SNRNP200O75643 AL136520.1-201ENST00000600311 1322 ntBASIC2.1□□□□□ -2.07
SNRNP200O75643 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SNRNP200O75643 Z98742.2-201ENST00000431564 187 ntBASIC2.1□□□□□ -2.07
SNRNP200O75643 AL121890.1-201ENST00000435457 205 ntBASIC2.1□□□□□ -2.07
SNRNP200O75643 HMGB1P45-201ENST00000435986 653 ntBASIC2.1□□□□□ -2.07
SNRNP200O75643 MTCYBP29-201ENST00000436327 1006 ntBASIC2.1□□□□□ -2.07
SNRNP200O75643 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.1□□□□□ -2.07
SNRNP200O75643 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.1□□□□□ -2.07
SNRNP200O75643 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms