Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC025627.2-201ENST00000576220 160 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC009977.1-201ENST00000586015 570 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AL669831.4-202ENST00000590817 238 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 DEFB131E-202ENST00000602581 683 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC073648.5-201ENST00000603502 305 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC091805.2-201ENST00000603848 235 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC004853.1-201ENST00000604902 698 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC006566.1-201ENST00000608943 513 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC131902.3-201ENST00000611767 581 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC108479.2-201ENST00000617314 601 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC099654.13-201ENST00000639774 207 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 OR5BE1P-202ENST00000641168 1176 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
ZIC3O60481 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.68□□□□□ -1.82
ZIC3O60481 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
ZIC3O60481 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.68□□□□□ -1.82
ZIC3O60481 FAM91A3P-201ENST00000456826 2544 ntBASIC3.68□□□□□ -1.82
ZIC3O60481 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.68□□□□□ -1.82
ZIC3O60481 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZIC3O60481 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ZIC3O60481 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZIC3O60481 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.67□□□□□ -1.82
ZIC3O60481 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.67□□□□□ -1.82
ZIC3O60481 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.67□□□□□ -1.82
ZIC3O60481 SNORD51-201ENST00000384320 80 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 RNU6-1207P-201ENST00000384343 107 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 Y_RNA.548-201ENST00000384656 105 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 RPL21P65-201ENST00000406094 466 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 AL160275.2-201ENST00000412010 394 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.67□□□□□ -1.82
ZIC3O60481 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.67□□□□□ -1.82
ZIC3O60481 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.67□□□□□ -1.82
ZIC3O60481 AIMP1P1-201ENST00000418670 937 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 AC006548.1-201ENST00000427470 102 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 AC092017.2-201ENST00000427600 362 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.67□□□□□ -1.82
ZIC3O60481 ELOCP18-201ENST00000434209 337 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.67□□□□□ -1.82
ZIC3O60481 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.67□□□□□ -1.82
ZIC3O60481 AL162151.2-201ENST00000448875 158 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.67□□□□□ -1.82
ZIC3O60481 snoU13.8-201ENST00000458890 104 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 HMGB1P25-201ENST00000468402 607 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.67□□□□□ -1.82
ZIC3O60481 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.67□□□□□ -1.82
ZIC3O60481 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.67□□□□□ -1.82
ZIC3O60481 RPL29P14-201ENST00000495837 428 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.67□□□□□ -1.82
ZIC3O60481 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.67□□□□□ -1.82
ZIC3O60481 RN7SKP116-201ENST00000516902 319 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.67□□□□□ -1.82
ZIC3O60481 AP003385.6-201ENST00000531603 374 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.67□□□□□ -1.82
ZIC3O60481 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.67□□□□□ -1.82
ZIC3O60481 EEF1B2P4-201ENST00000551398 348 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 AC009101.1-201ENST00000568135 242 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.67□□□□□ -1.82
ZIC3O60481 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.67□□□□□ -1.82
ZIC3O60481 AL021997.1-201ENST00000605757 193 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 OR6R2P-201ENST00000609216 300 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 MIR6868-201ENST00000611215 58 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.67□□□□□ -1.82
ZIC3O60481 AC026585.1-201ENST00000619582 524 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 AC068792.1-201ENST00000621354 417 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.67□□□□□ -1.82
ZIC3O60481 AC067931.1-201ENST00000624190 671 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 CR381572.1-201ENST00000625098 102 ntBASIC3.67□□□□□ -1.82
ZIC3O60481 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ZIC3O60481 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.67□□□□□ -1.82
ZIC3O60481 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZIC3O60481 MARK2P15-201ENST00000432204 2186 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZIC3O60481 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZIC3O60481 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ZIC3O60481 Y_RNA.3-201ENST00000362331 103 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 RNA5SP388-201ENST00000362584 119 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 Y_RNA.41-201ENST00000362646 102 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 Y_RNA.46-201ENST00000362695 102 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 SNORD35B-201ENST00000363660 87 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 RNU6-359P-201ENST00000365466 108 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
ZIC3O60481 RPL7P25-201ENST00000404151 721 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 PPIAP31-201ENST00000405422 495 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 AL356967.1-201ENST00000406305 431 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 MIR1193-201ENST00000408109 78 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 Y_RNA.619-201ENST00000410951 90 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 RN7SKP263-201ENST00000411194 309 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.66□□□□□ -1.82
ZIC3O60481 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.66□□□□□ -1.82
ZIC3O60481 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ZIC3O60481 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 CKS1BP5-201ENST00000434172 273 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms