Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RPL23AP57-201ENST00000332361 466 ntBASIC3.54□□□□□ -1.84
PRKNO60260 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRKNO60260 MIR554-201ENST00000384874 96 ntBASIC3.54□□□□□ -1.84
PRKNO60260 DEFB108C-201ENST00000400154 252 ntBASIC3.54□□□□□ -1.84
PRKNO60260 AL590704.1-201ENST00000402856 794 ntBASIC3.54□□□□□ -1.84
PRKNO60260 RN7SKP27-201ENST00000410684 333 ntBASIC3.54□□□□□ -1.84
PRKNO60260 TPMTP2-201ENST00000414372 726 ntBASIC3.54□□□□□ -1.84
PRKNO60260 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.54□□□□□ -1.84
PRKNO60260 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.54□□□□□ -1.84
PRKNO60260 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKNO60260 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.54□□□□□ -1.84
PRKNO60260 RPL23AP74-201ENST00000437246 471 ntBASIC3.54□□□□□ -1.84
PRKNO60260 MTND5P14-201ENST00000441481 1267 ntBASIC3.54□□□□□ -1.84
PRKNO60260 MTCO1P27-201ENST00000448269 226 ntBASIC3.54□□□□□ -1.84
PRKNO60260 ARPC3P5-201ENST00000448802 534 ntBASIC3.54□□□□□ -1.84
PRKNO60260 DNAJC19P1-201ENST00000455312 319 ntBASIC3.54□□□□□ -1.84
PRKNO60260 BX322784.1-201ENST00000455793 1077 ntBASIC3.54□□□□□ -1.84
PRKNO60260 UBDP1-202ENST00000457888 382 ntBASIC3.54□□□□□ -1.84
PRKNO60260 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PRKNO60260 AC090453.1-201ENST00000495560 436 ntBASIC3.54□□□□□ -1.84
PRKNO60260 AC093767.1-201ENST00000504523 156 ntBASIC3.54□□□□□ -1.84
PRKNO60260 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.54□□□□□ -1.84
PRKNO60260 AC093809.1-201ENST00000509155 340 ntBASIC3.54□□□□□ -1.84
PRKNO60260 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.54□□□□□ -1.84
PRKNO60260 MTCO2P32-201ENST00000514865 403 ntBASIC3.54□□□□□ -1.84
PRKNO60260 AC116347.2-201ENST00000514912 523 ntBASIC3.54□□□□□ -1.84
PRKNO60260 RN7SKP82-201ENST00000516786 223 ntBASIC3.54□□□□□ -1.84
PRKNO60260 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
PRKNO60260 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKNO60260 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.54□□□□□ -1.84
PRKNO60260 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKNO60260 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKNO60260 AC092470.1-201ENST00000546187 132 ntBASIC3.54□□□□□ -1.84
PRKNO60260 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.54□□□□□ -1.84
PRKNO60260 AC091489.2-201ENST00000566263 604 ntBASIC3.54□□□□□ -1.84
PRKNO60260 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKNO60260 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.54□□□□□ -1.84
PRKNO60260 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PRKNO60260 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.54□□□□□ -1.84
PRKNO60260 AC025946.2-201ENST00000603398 234 ntBASIC3.54□□□□□ -1.84
PRKNO60260 YWHAQP7-201ENST00000603536 658 ntBASIC3.54□□□□□ -1.84
PRKNO60260 AC025588.3-201ENST00000604182 274 ntBASIC3.54□□□□□ -1.84
PRKNO60260 AC087752.4-201ENST00000605911 462 ntBASIC3.54□□□□□ -1.84
PRKNO60260 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKNO60260 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKNO60260 AC104073.3-201ENST00000610942 955 ntBASIC3.54□□□□□ -1.84
PRKNO60260 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.54□□□□□ -1.84
PRKNO60260 AC009318.4-201ENST00000620496 486 ntBASIC3.54□□□□□ -1.84
PRKNO60260 CYP3A51P-201ENST00000633513 256 ntBASIC3.54□□□□□ -1.84
PRKNO60260 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKNO60260 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
PRKNO60260 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PRKNO60260 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.54□□□□□ -1.84
PRKNO60260 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PRKNO60260 UBE3AP2-201ENST00000429033 2259 ntBASIC3.54□□□□□ -1.84
PRKNO60260 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.53□□□□□ -1.84
PRKNO60260 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.53□□□□□ -1.84
PRKNO60260 MTND4P5-201ENST00000435821 1374 ntBASIC3.53□□□□□ -1.84
PRKNO60260 MTND4P4-201ENST00000439033 1366 ntBASIC3.53□□□□□ -1.84
PRKNO60260 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.53□□□□□ -1.84
PRKNO60260 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.53□□□□□ -1.84
PRKNO60260 FGF7P2-201ENST00000332473 296 ntBASIC3.53□□□□□ -1.84
PRKNO60260 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRKNO60260 Y_RNA.97-201ENST00000363094 102 ntBASIC3.53□□□□□ -1.84
PRKNO60260 U8.14-201ENST00000390843 143 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AL031679.1-201ENST00000400616 525 ntBASIC3.53□□□□□ -1.84
PRKNO60260 RPL17P12-201ENST00000413391 526 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AL031779.1-201ENST00000415663 330 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.53□□□□□ -1.84
PRKNO60260 FNDC3CP-201ENST00000420795 1155 ntBASIC3.53□□□□□ -1.84
PRKNO60260 RPS27AP14-201ENST00000422868 454 ntBASIC3.53□□□□□ -1.84
PRKNO60260 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.53□□□□□ -1.84
PRKNO60260 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.53□□□□□ -1.84
PRKNO60260 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.53□□□□□ -1.84
PRKNO60260 NOTCH2P1-201ENST00000443481 624 ntBASIC3.53□□□□□ -1.84
PRKNO60260 PAXBP1P1-201ENST00000449315 447 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.53□□□□□ -1.84
PRKNO60260 AC005297.2-201ENST00000450430 606 ntBASIC3.53□□□□□ -1.84
PRKNO60260 BX276092.4-201ENST00000452056 248 ntBASIC3.53□□□□□ -1.84
PRKNO60260 CFTRP1-201ENST00000456646 183 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.53□□□□□ -1.84
PRKNO60260 RNA5SP269-201ENST00000459032 137 ntBASIC3.53□□□□□ -1.84
PRKNO60260 RPL37P6-202ENST00000464216 403 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AP000797.1-201ENST00000478870 387 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.53□□□□□ -1.84
PRKNO60260 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.53□□□□□ -1.84
PRKNO60260 POU5F1P7-201ENST00000508759 541 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AC079140.3-201ENST00000511111 550 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AF131216.2-201ENST00000512316 564 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.53□□□□□ -1.84
PRKNO60260 RN7SKP277-201ENST00000516895 283 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AC025881.1-201ENST00000518851 512 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.53□□□□□ -1.84
PRKNO60260 AP004247.1-201ENST00000531556 1289 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AC068587.4-201ENST00000533893 186 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AC022880.1-201ENST00000534017 973 ntBASIC3.53□□□□□ -1.84
PRKNO60260 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.53□□□□□ -1.84
PRKNO60260 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PRKNO60260 AC090877.1-201ENST00000561418 344 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms