Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AP000787.2-201ENST00000604432 568 ntBASIC2.66□□□□□ -1.98
SGCEO43556 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.66□□□□□ -1.98
SGCEO43556 AC026422.1-201ENST00000623961 452 ntBASIC2.66□□□□□ -1.98
SGCEO43556 AC098679.5-201ENST00000624394 571 ntBASIC2.66□□□□□ -1.98
SGCEO43556 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SGCEO43556 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.66□□□□□ -1.98
SGCEO43556 AC130650.2-201ENST00000618736 2403 ntBASIC2.66□□□□□ -1.98
SGCEO43556 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.65□□□□□ -1.98
SGCEO43556 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.65□□□□□ -1.99
SGCEO43556 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.65□□□□□ -1.99
SGCEO43556 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
SGCEO43556 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SGCEO43556 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SGCEO43556 CYCSP45-201ENST00000402289 315 ntBASIC2.65□□□□□ -1.99
SGCEO43556 U3.42-201ENST00000408746 214 ntBASIC2.65□□□□□ -1.99
SGCEO43556 MIR1289-1-201ENST00000408836 144 ntBASIC2.65□□□□□ -1.99
SGCEO43556 HMGN2P35-201ENST00000412164 270 ntBASIC2.65□□□□□ -1.99
SGCEO43556 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.65□□□□□ -1.99
SGCEO43556 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.65□□□□□ -1.99
SGCEO43556 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.65□□□□□ -1.99
SGCEO43556 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.65□□□□□ -1.99
SGCEO43556 RPS29P12-201ENST00000460178 152 ntBASIC2.65□□□□□ -1.99
SGCEO43556 VPS26AP1-201ENST00000483197 979 ntBASIC2.65□□□□□ -1.99
SGCEO43556 RN7SL633P-201ENST00000488974 297 ntBASIC2.65□□□□□ -1.99
SGCEO43556 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SGCEO43556 RN7SKP43-201ENST00000516173 320 ntBASIC2.65□□□□□ -1.99
SGCEO43556 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.65□□□□□ -1.99
SGCEO43556 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.65□□□□□ -1.99
SGCEO43556 FAM60BP-201ENST00000578364 658 ntBASIC2.65□□□□□ -1.99
SGCEO43556 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.65□□□□□ -1.99
SGCEO43556 AC024220.1-201ENST00000603675 484 ntBASIC2.65□□□□□ -1.99
SGCEO43556 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.65□□□□□ -1.99
SGCEO43556 AP004247.3-201ENST00000608682 624 ntBASIC2.65□□□□□ -1.99
SGCEO43556 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.65□□□□□ -1.99
SGCEO43556 AC007275.1-201ENST00000621243 671 ntBASIC2.65□□□□□ -1.99
SGCEO43556 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SGCEO43556 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SGCEO43556 AC011460.1-201ENST00000636268 1834 ntBASIC2.65□□□□□ -1.99
SGCEO43556 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.65□□□□□ -1.99
SGCEO43556 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
SGCEO43556 AL049780.3-201ENST00000624612 1583 ntBASIC2.65□□□□□ -1.99
SGCEO43556 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SGCEO43556 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SGCEO43556 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.65□□□□□ -1.99
SGCEO43556 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.64□□□□□ -1.99
SGCEO43556 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SGCEO43556 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SGCEO43556 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.64□□□□□ -1.99
SGCEO43556 RPL23AP57-201ENST00000332361 466 ntBASIC2.64□□□□□ -1.99
SGCEO43556 AC073325.2-201ENST00000339545 159 ntBASIC2.64□□□□□ -1.99
SGCEO43556 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SGCEO43556 RNU5D-1-201ENST00000363299 116 ntBASIC2.64□□□□□ -1.99
SGCEO43556 SNORD88.1-201ENST00000408684 91 ntBASIC2.64□□□□□ -1.99
SGCEO43556 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.64□□□□□ -1.99
SGCEO43556 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.64□□□□□ -1.99
SGCEO43556 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.64□□□□□ -1.99
SGCEO43556 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.64□□□□□ -1.99
SGCEO43556 RPS6P14-201ENST00000425165 719 ntBASIC2.64□□□□□ -1.99
SGCEO43556 AL035410.1-201ENST00000427409 427 ntBASIC2.64□□□□□ -1.99
SGCEO43556 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.64□□□□□ -1.99
SGCEO43556 AL590762.3-201ENST00000436372 640 ntBASIC2.64□□□□□ -1.99
SGCEO43556 AC127537.2-201ENST00000439258 465 ntBASIC2.64□□□□□ -1.99
SGCEO43556 RPS26P30-201ENST00000443431 335 ntBASIC2.64□□□□□ -1.99
SGCEO43556 AL031183.1-201ENST00000457667 207 ntBASIC2.64□□□□□ -1.99
SGCEO43556 RPS3AP43-201ENST00000479743 781 ntBASIC2.64□□□□□ -1.99
SGCEO43556 AP001025.2-201ENST00000490908 477 ntBASIC2.64□□□□□ -1.99
SGCEO43556 AC006445.1-201ENST00000491925 405 ntBASIC2.64□□□□□ -1.99
SGCEO43556 PRELID3BP6-201ENST00000503839 571 ntBASIC2.64□□□□□ -1.99
SGCEO43556 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SGCEO43556 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.64□□□□□ -1.99
SGCEO43556 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.64□□□□□ -1.99
SGCEO43556 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.64□□□□□ -1.99
SGCEO43556 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.64□□□□□ -1.99
SGCEO43556 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.64□□□□□ -1.99
SGCEO43556 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SGCEO43556 AC125611.2-201ENST00000551907 647 ntBASIC2.64□□□□□ -1.99
SGCEO43556 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.64□□□□□ -1.99
SGCEO43556 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.64□□□□□ -1.99
SGCEO43556 GLUD1P4-201ENST00000590914 418 ntBASIC2.64□□□□□ -1.99
SGCEO43556 AC008083.4-201ENST00000615076 444 ntBASIC2.64□□□□□ -1.99
SGCEO43556 ZNF663P-202ENST00000641770 1131 ntBASIC2.64□□□□□ -1.99
SGCEO43556 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
SGCEO43556 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SGCEO43556 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.64□□□□□ -1.99
SGCEO43556 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SGCEO43556 AC111188.2-201ENST00000529697 1387 ntBASIC2.63□□□□□ -1.99
SGCEO43556 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.63□□□□□ -1.99
SGCEO43556 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.63□□□□□ -1.99
SGCEO43556 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SGCEO43556 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.63□□□□□ -1.99
SGCEO43556 RNU6-883P-201ENST00000384597 107 ntBASIC2.63□□□□□ -1.99
SGCEO43556 GSTA8P-201ENST00000404253 637 ntBASIC2.63□□□□□ -1.99
SGCEO43556 RPS15AP38-201ENST00000413110 372 ntBASIC2.63□□□□□ -1.99
SGCEO43556 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.63□□□□□ -1.99
SGCEO43556 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SGCEO43556 TMEM167AP1-201ENST00000423409 219 ntBASIC2.63□□□□□ -1.99
SGCEO43556 PTP4A1P3-201ENST00000433661 420 ntBASIC2.63□□□□□ -1.99
SGCEO43556 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.63□□□□□ -1.99
SGCEO43556 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.63□□□□□ -1.99
SGCEO43556 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms