Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGB3O15347 AC007336.1-201ENST00000576365 3828 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 AC093536.2-201ENST00000565257 1406 ntBASIC2.17□□□□□ -2.06
HMGB3O15347 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMGB3O15347 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
HMGB3O15347 AC046144.1-201ENST00000478559 1853 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 RNU6-819P-201ENST00000364116 107 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 RN7SKP227-201ENST00000364445 330 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 TAS2R15P-201ENST00000390674 928 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HMGB3O15347 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGB3O15347 RPS15AP38-201ENST00000413110 372 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AL356320.2-201ENST00000417263 507 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AC099677.1-201ENST00000420575 175 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGB3O15347 AC018644.1-201ENST00000429934 551 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGB3O15347 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGB3O15347 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGB3O15347 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.16□□□□□ -2.06
HMGB3O15347 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGB3O15347 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGB3O15347 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGB3O15347 AC068135.1-201ENST00000446164 246 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AC073901.1-201ENST00000462471 408 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGB3O15347 NAMPTP2-201ENST00000505629 1115 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGB3O15347 RNU1-104P-201ENST00000517280 175 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGB3O15347 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.16□□□□□ -2.06
HMGB3O15347 AP001804.3-201ENST00000525146 880 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 OR5AK3P-201ENST00000527486 1297 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGB3O15347 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AC087241.2-201ENST00000535801 324 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.16□□□□□ -2.06
HMGB3O15347 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGB3O15347 AC084824.1-201ENST00000550917 1005 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
HMGB3O15347 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGB3O15347 AC079880.2-201ENST00000603790 1213 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AL513477.2-201ENST00000607858 568 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AC245517.5-201ENST00000611529 162 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AC090116.1-201ENST00000615679 446 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGB3O15347 AC026422.1-201ENST00000623961 452 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 AL356118.1-201ENST00000635272 1078 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 MTND2P41-201ENST00000637599 773 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
HMGB3O15347 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HMGB3O15347 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGB3O15347 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
HMGB3O15347 ZNF271P-202ENST00000465539 1970 ntBASIC2.16□□□□□ -2.06
HMGB3O15347 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.15□□□□□ -2.06
HMGB3O15347 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
HMGB3O15347 AL359693.1-201ENST00000614959 2407 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HMGB3O15347 RNU5D-1-201ENST00000363299 116 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 SNORA25.6-201ENST00000364121 118 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 SNORA71.1-201ENST00000364523 117 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HMGB3O15347 SET-203ENST00000372688 801 ntTSL 2 BASIC2.15□□□□□ -2.07
HMGB3O15347 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
HMGB3O15347 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGB3O15347 RNU6-712P-201ENST00000410558 100 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.15□□□□□ -2.07
HMGB3O15347 AC022018.1-201ENST00000430685 241 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGB3O15347 AC092685.1-201ENST00000447960 1243 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 AL133547.1-201ENST00000448546 220 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 NIPA2P5-201ENST00000452282 464 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 AC010099.1-201ENST00000455434 375 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
HMGB3O15347 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.15□□□□□ -2.07
HMGB3O15347 SCGB1D5P-201ENST00000515134 247 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGB3O15347 RNU6-488P-201ENST00000515918 99 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 SNORA74D-201ENST00000516404 141 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 HAUS1P3-201ENST00000523909 662 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.15□□□□□ -2.07
HMGB3O15347 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGB3O15347 OR7K1P-201ENST00000546439 926 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 NOP56P3-201ENST00000549457 385 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGB3O15347 AC009268.1-201ENST00000561352 1203 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGB3O15347 AC136624.4-201ENST00000573044 370 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 MIR5680-201ENST00000577577 84 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 MIR3160-1-201ENST00000577972 85 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGB3O15347 AC242628.1-201ENST00000606810 391 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 AC004775.1-201ENST00000607389 753 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 AC039056.2-201ENST00000622261 511 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGB3O15347 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGB3O15347 AC012442.3-202ENST00000636742 206 ntBASIC2.15□□□□□ -2.07
HMGB3O15347 AL513185.3-201ENST00000433335 1300 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms