Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.33□□□□□ -1.72
CUX2O14529 AC003001.2-201ENST00000616294 831 ntBASIC4.33□□□□□ -1.72
CUX2O14529 AC015726.3-201ENST00000624501 418 ntBASIC4.33□□□□□ -1.72
CUX2O14529 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.33□□□□□ -1.72
CUX2O14529 AC096656.1-201ENST00000623826 1364 ntBASIC4.33□□□□□ -1.72
CUX2O14529 AC114546.3-201ENST00000623582 1734 ntBASIC4.33□□□□□ -1.72
CUX2O14529 AC109315.1-201ENST00000584143 1347 ntBASIC4.33□□□□□ -1.72
CUX2O14529 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CUX2O14529 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CUX2O14529 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CUX2O14529 RNU6-582P-201ENST00000362989 107 ntBASIC4.32□□□□□ -1.72
CUX2O14529 MTND4P24-201ENST00000424002 397 ntBASIC4.32□□□□□ -1.72
CUX2O14529 RPS24P8-201ENST00000431490 402 ntBASIC4.32□□□□□ -1.72
CUX2O14529 XKRY2-201ENST00000442362 1093 ntBASIC4.32□□□□□ -1.72
CUX2O14529 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.32□□□□□ -1.72
CUX2O14529 OR52A4P-202ENST00000481634 799 ntBASIC4.32□□□□□ -1.72
CUX2O14529 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.32□□□□□ -1.72
CUX2O14529 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.32□□□□□ -1.72
CUX2O14529 MIR449C-201ENST00000516047 92 ntBASIC4.32□□□□□ -1.72
CUX2O14529 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.32□□□□□ -1.72
CUX2O14529 SMARCE1P4-201ENST00000523647 241 ntBASIC4.32□□□□□ -1.72
CUX2O14529 OR5AK3P-201ENST00000527486 1297 ntBASIC4.32□□□□□ -1.72
CUX2O14529 GNAI2P1-201ENST00000541815 315 ntBASIC4.32□□□□□ -1.72
CUX2O14529 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.32□□□□□ -1.72
CUX2O14529 AC005046.1-201ENST00000608515 625 ntBASIC4.32□□□□□ -1.72
CUX2O14529 MIR6845-201ENST00000613182 61 ntBASIC4.32□□□□□ -1.72
CUX2O14529 AC009487.2-201ENST00000420969 6821 ntBASIC4.32□□□□□ -1.72
CUX2O14529 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CUX2O14529 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CUX2O14529 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CUX2O14529 AL359893.1-201ENST00000447628 1580 ntBASIC4.32□□□□□ -1.72
CUX2O14529 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CUX2O14529 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CUX2O14529 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CUX2O14529 Y_RNA.112-201ENST00000363250 102 ntBASIC4.31□□□□□ -1.72
CUX2O14529 SNORD51.1-201ENST00000365405 77 ntBASIC4.31□□□□□ -1.72
CUX2O14529 AC019155.1-201ENST00000382242 574 ntBASIC4.31□□□□□ -1.72
CUX2O14529 AL691517.1-201ENST00000440833 1235 ntBASIC4.31□□□□□ -1.72
CUX2O14529 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.31□□□□□ -1.72
CUX2O14529 HMGB1P26-201ENST00000452520 628 ntBASIC4.31□□□□□ -1.72
CUX2O14529 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.31□□□□□ -1.72
CUX2O14529 CACYBPP2-201ENST00000453625 678 ntBASIC4.31□□□□□ -1.72
CUX2O14529 AC107398.1-201ENST00000486904 505 ntBASIC4.31□□□□□ -1.72
CUX2O14529 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.31□□□□□ -1.72
CUX2O14529 AC108078.2-201ENST00000510750 236 ntBASIC4.31□□□□□ -1.72
CUX2O14529 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.31□□□□□ -1.72
CUX2O14529 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.31□□□□□ -1.72
CUX2O14529 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.31□□□□□ -1.72
CUX2O14529 AL022099.1-201ENST00000604551 712 ntBASIC4.31□□□□□ -1.72
CUX2O14529 AL021368.1-201ENST00000607490 540 ntBASIC4.31□□□□□ -1.72
CUX2O14529 AL355816.1-201ENST00000607951 118 ntBASIC4.31□□□□□ -1.72
CUX2O14529 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CUX2O14529 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CUX2O14529 AC093311.1-201ENST00000506586 2021 ntBASIC4.31□□□□□ -1.72
CUX2O14529 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CUX2O14529 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CUX2O14529 AC011155.1-201ENST00000316512 456 ntBASIC4.3□□□□□ -1.72
CUX2O14529 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CUX2O14529 AL590004.2-201ENST00000404787 371 ntBASIC4.3□□□□□ -1.72
CUX2O14529 AC004987.3-201ENST00000413879 771 ntBASIC4.3□□□□□ -1.72
CUX2O14529 DYNLL1P6-201ENST00000503440 264 ntBASIC4.3□□□□□ -1.72
CUX2O14529 AC111193.1-201ENST00000504097 155 ntBASIC4.3□□□□□ -1.72
CUX2O14529 AC004923.2-201ENST00000529649 369 ntBASIC4.3□□□□□ -1.72
CUX2O14529 POLR2KP1-201ENST00000553226 168 ntBASIC4.3□□□□□ -1.72
CUX2O14529 OR11H5P-202ENST00000641612 1325 ntBASIC4.3□□□□□ -1.72
CUX2O14529 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CUX2O14529 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CUX2O14529 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.3□□□□□ -1.72
CUX2O14529 RSL24D1P8-201ENST00000434442 492 ntBASIC4.3□□□□□ -1.72
CUX2O14529 EXTL2P1-201ENST00000446218 416 ntBASIC4.3□□□□□ -1.72
CUX2O14529 RNU7-170P-201ENST00000459303 61 ntBASIC4.3□□□□□ -1.72
CUX2O14529 USP9YP5-201ENST00000511770 630 ntBASIC4.3□□□□□ -1.72
CUX2O14529 RNA5SP281-201ENST00000516504 135 ntBASIC4.3□□□□□ -1.72
CUX2O14529 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.3□□□□□ -1.72
CUX2O14529 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.3□□□□□ -1.72
CUX2O14529 ZNF92P3-201ENST00000596594 954 ntBASIC4.3□□□□□ -1.72
CUX2O14529 AL020991.1-201ENST00000612314 373 ntBASIC4.3□□□□□ -1.72
CUX2O14529 AL118556.2-201ENST00000614375 824 ntBASIC4.3□□□□□ -1.72
CUX2O14529 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CUX2O14529 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.29□□□□□ -1.72
CUX2O14529 AL445437.1-201ENST00000623157 3087 ntBASIC4.29□□□□□ -1.72
CUX2O14529 AC073136.2-201ENST00000417282 849 ntBASIC4.29□□□□□ -1.72
CUX2O14529 FAM204CP-201ENST00000424489 642 ntBASIC4.29□□□□□ -1.72
CUX2O14529 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.29□□□□□ -1.72
CUX2O14529 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.29□□□□□ -1.72
CUX2O14529 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.29□□□□□ -1.72
CUX2O14529 TPMTP4-201ENST00000450749 678 ntBASIC4.29□□□□□ -1.72
CUX2O14529 CABYRP1-201ENST00000465493 1045 ntBASIC4.29□□□□□ -1.72
CUX2O14529 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.29□□□□□ -1.72
CUX2O14529 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.29□□□□□ -1.72
CUX2O14529 RNA5SP490-201ENST00000517141 136 ntBASIC4.29□□□□□ -1.72
CUX2O14529 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.29□□□□□ -1.72
CUX2O14529 AC055876.1-202ENST00000567053 138 ntBASIC4.29□□□□□ -1.72
CUX2O14529 MIR3605-201ENST00000583214 100 ntBASIC4.29□□□□□ -1.72
CUX2O14529 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.29□□□□□ -1.72
CUX2O14529 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.29□□□□□ -1.72
CUX2O14529 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.29□□□□□ -1.72
CUX2O14529 OR4H6P-202ENST00000603819 340 ntBASIC4.29□□□□□ -1.72
CUX2O14529 AL359821.1-201ENST00000605519 182 ntBASIC4.29□□□□□ -1.72
CUX2O14529 AL354696.1-201ENST00000614652 497 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms