Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC019227.1-201ENST00000526902 510 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.15□□□□□ -2.07
SDCBPO00560 AC128657.1-201ENST00000549459 145 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.15□□□□□ -2.07
SDCBPO00560 ELOCP29-201ENST00000588193 334 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 SUMO2P14-201ENST00000604488 293 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 AC011374.2-201ENST00000607135 526 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 AC135507.2-201ENST00000612443 309 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SDCBPO00560 AP000676.4-201ENST00000624659 623 ntBASIC2.15□□□□□ -2.07
SDCBPO00560 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.15□□□□□ -2.07
SDCBPO00560 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.15□□□□□ -2.07
SDCBPO00560 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.15□□□□□ -2.07
SDCBPO00560 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SDCBPO00560 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.15□□□□□ -2.07
SDCBPO00560 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.15□□□□□ -2.07
SDCBPO00560 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SDCBPO00560 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.14□□□□□ -2.07
SDCBPO00560 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.14□□□□□ -2.07
SDCBPO00560 SNORD62.1-201ENST00000362541 86 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 RNU6-859P-201ENST00000362728 107 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 RNU6-263P-201ENST00000363811 107 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 U8.8-201ENST00000365399 135 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.14□□□□□ -2.07
SDCBPO00560 AL121972.1-201ENST00000402023 252 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 AL162578.1-201ENST00000406202 378 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 SNORA11.1-201ENST00000408133 129 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 RPLP0P7-201ENST00000416050 667 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.14□□□□□ -2.07
SDCBPO00560 RPL36P19-201ENST00000430744 301 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.14□□□□□ -2.07
SDCBPO00560 AC107083.1-201ENST00000439643 279 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 RPS12P2-201ENST00000439728 269 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.14□□□□□ -2.07
SDCBPO00560 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.14□□□□□ -2.07
SDCBPO00560 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.14□□□□□ -2.07
SDCBPO00560 RPS3AP14-201ENST00000483907 780 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.14□□□□□ -2.07
SDCBPO00560 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.14□□□□□ -2.07
SDCBPO00560 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.14□□□□□ -2.07
SDCBPO00560 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.14□□□□□ -2.07
SDCBPO00560 AC096725.1-201ENST00000514266 313 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 AC026801.2-201ENST00000515352 425 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 RNA5SP282-201ENST00000516355 108 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 RN7SKP96-201ENST00000516948 297 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 NOP56P3-201ENST00000549457 385 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 AC125611.2-201ENST00000551907 647 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SDCBPO00560 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.14□□□□□ -2.07
SDCBPO00560 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.14□□□□□ -2.07
SDCBPO00560 AADACP1-206ENST00000561502 1193 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.14□□□□□ -2.07
SDCBPO00560 AC017100.2-201ENST00000584628 355 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 DUXAP4-201ENST00000603046 613 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 AL137847.3-201ENST00000611521 109 ntBASIC2.14□□□□□ -2.07
SDCBPO00560 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.14□□□□□ -2.07
SDCBPO00560 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.14□□□□□ -2.07
SDCBPO00560 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SDCBPO00560 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.13□□□□□ -2.07
SDCBPO00560 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SDCBPO00560 RNVU1-3-201ENST00000364313 161 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 CD24P4-201ENST00000382840 243 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 SNORA9-201ENST00000384215 133 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 AL360182.1-201ENST00000397433 468 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.13□□□□□ -2.07
SDCBPO00560 MIR1250-201ENST00000408098 113 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 RNU4-65P-201ENST00000410473 140 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 RNU4-78P-201ENST00000410940 126 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 AC073264.1-201ENST00000411508 416 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 AC096664.2-201ENST00000411843 406 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.13□□□□□ -2.07
SDCBPO00560 ATG3P1-201ENST00000419507 911 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 COTL1P1-201ENST00000422309 375 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.13□□□□□ -2.07
SDCBPO00560 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.13□□□□□ -2.07
SDCBPO00560 AC233728.2-201ENST00000425348 757 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 AL445669.2-201ENST00000454425 421 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 snoU13.3-201ENST00000459441 104 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.13□□□□□ -2.07
SDCBPO00560 AC090543.1-201ENST00000492168 485 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 RPL21P131-201ENST00000497298 483 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.13□□□□□ -2.07
SDCBPO00560 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.13□□□□□ -2.07
SDCBPO00560 MTCYBP37-201ENST00000510642 1133 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.13□□□□□ -2.07
SDCBPO00560 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 TRAV11-201ENST00000539512 339 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.13□□□□□ -2.07
SDCBPO00560 AC012182.1-201ENST00000570133 895 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.13□□□□□ -2.07
SDCBPO00560 MIR3200-201ENST00000580767 85 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.13□□□□□ -2.07
SDCBPO00560 AC008687.2-201ENST00000597865 520 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 AC022387.2-201ENST00000604050 448 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 ATP1B3P1-201ENST00000605365 821 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 AC008962.1-201ENST00000605729 304 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 AC091046.2-201ENST00000620775 665 ntBASIC2.13□□□□□ -2.07
SDCBPO00560 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SDCBPO00560 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.13□□□□□ -2.07
SDCBPO00560 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms