Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.23□□□□□ -2.05
CACNA1AO00555 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.23□□□□□ -2.05
CACNA1AO00555 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.23□□□□□ -2.05
CACNA1AO00555 TGIF1P1-201ENST00000558095 802 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.23□□□□□ -2.05
CACNA1AO00555 AC090970.3-201ENST00000612566 866 ntBASIC2.23□□□□□ -2.05
CACNA1AO00555 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CACNA1AO00555 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CACNA1AO00555 SNORD74.4-201ENST00000364129 80 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 RNU6-1027P-201ENST00000383998 107 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 AC080125.1-201ENST00000414888 684 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CACNA1AO00555 NPM1P29-201ENST00000483112 803 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.22□□□□□ -2.05
CACNA1AO00555 RNA5SP121-201ENST00000516537 101 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 RNU6-1223P-201ENST00000517124 104 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
CACNA1AO00555 AC021269.2-201ENST00000532318 330 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 AC068339.2-201ENST00000534395 618 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.22□□□□□ -2.05
CACNA1AO00555 OR4G1P-201ENST00000588632 938 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.22□□□□□ -2.05
CACNA1AO00555 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CACNA1AO00555 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CACNA1AO00555 CUL4AP1-201ENST00000514750 1863 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CACNA1AO00555 AC245054.2-201ENST00000415639 319 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 AC016687.1-201ENST00000482574 353 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC2.22□□□□□ -2.05
CACNA1AO00555 RNA5SP380-201ENST00000517190 98 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 OR8L1P-201ENST00000534005 955 ntBASIC2.22□□□□□ -2.05
CACNA1AO00555 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.22□□□□□ -2.05
CACNA1AO00555 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CACNA1AO00555 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CACNA1AO00555 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.21□□□□□ -2.06
CACNA1AO00555 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.21□□□□□ -2.06
CACNA1AO00555 Y_RNA.60-201ENST00000362831 98 ntBASIC2.21□□□□□ -2.06
CACNA1AO00555 U3.11-201ENST00000364476 212 ntBASIC2.21□□□□□ -2.06
CACNA1AO00555 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CACNA1AO00555 MIR548J-201ENST00000408833 112 ntBASIC2.21□□□□□ -2.06
CACNA1AO00555 PTP4A1P7-201ENST00000423476 514 ntBASIC2.21□□□□□ -2.06
CACNA1AO00555 AL138785.1-201ENST00000425821 331 ntBASIC2.21□□□□□ -2.06
CACNA1AO00555 AC100870.1-201ENST00000522035 505 ntBASIC2.21□□□□□ -2.06
CACNA1AO00555 CR383656.8-201ENST00000549046 145 ntBASIC2.21□□□□□ -2.06
CACNA1AO00555 AC002487.1-201ENST00000604565 994 ntBASIC2.21□□□□□ -2.06
CACNA1AO00555 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CACNA1AO00555 OR10AB1P-201ENST00000609613 938 ntBASIC2.21□□□□□ -2.06
CACNA1AO00555 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
CACNA1AO00555 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
CACNA1AO00555 RNU6-492P-201ENST00000363035 104 ntBASIC2.21□□□□□ -2.06
CACNA1AO00555 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.21□□□□□ -2.06
CACNA1AO00555 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.21□□□□□ -2.06
CACNA1AO00555 ASNSP4-201ENST00000511103 447 ntBASIC2.21□□□□□ -2.06
CACNA1AO00555 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CACNA1AO00555 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.21□□□□□ -2.06
CACNA1AO00555 CRYM-AS1-204ENST00000637983 556 ntBASIC2.21□□□□□ -2.06
CACNA1AO00555 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
CACNA1AO00555 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.21□□□□□ -2.06
CACNA1AO00555 AL591416.1-201ENST00000404015 867 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 USP9YP20-201ENST00000419224 558 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 RPL31P35-201ENST00000431058 377 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 AC105402.2-201ENST00000438503 358 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 RPL23AP55-201ENST00000498163 452 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.2□□□□□ -2.06
CACNA1AO00555 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.2□□□□□ -2.06
CACNA1AO00555 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.2□□□□□ -2.06
CACNA1AO00555 AC233702.9-201ENST00000581528 203 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.2□□□□□ -2.06
CACNA1AO00555 AC138915.3-201ENST00000562908 1389 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.2□□□□□ -2.06
CACNA1AO00555 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CACNA1AO00555 RNU2-17P-201ENST00000410290 190 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CACNA1AO00555 RPL38P4-201ENST00000502376 214 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 OR5H3P-201ENST00000502817 919 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 ARL2BPP6-201ENST00000512757 439 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 MIR4255-201ENST00000579351 72 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 MAPK10-322ENST00000641485 4530 ntBASIC2.2□□□□□ -2.06
CACNA1AO00555 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CACNA1AO00555 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CACNA1AO00555 RNU6-105P-201ENST00000363909 104 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
CACNA1AO00555 EIF5P1-201ENST00000400019 1231 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 GSTA12P-201ENST00000402398 508 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.19□□□□□ -2.06
CACNA1AO00555 AL583832.1-201ENST00000603227 784 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 AL591516.1-201ENST00000611326 274 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 MIR1291-201ENST00000627649 87 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CACNA1AO00555 FAM35CP-201ENST00000554755 2470 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CACNA1AO00555 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.19□□□□□ -2.06
CACNA1AO00555 U3.6-201ENST00000363622 211 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 RNU1-89P-201ENST00000384592 164 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 SNORA67.5-201ENST00000391036 107 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 RNA5SP107-201ENST00000411358 122 ntBASIC2.19□□□□□ -2.06
CACNA1AO00555 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.19□□□□□ -2.06
CACNA1AO00555 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC2.19□□□□□ -2.06
CACNA1AO00555 RPL23AP22-201ENST00000437556 453 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms