Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC025033.1-201ENST00000463883 194 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 AC146507.1-201ENST00000468335 354 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC1.95□□□□□ -2.1
HMGN4O00479 RN7SKP283-201ENST00000517197 270 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 AF279873.1-201ENST00000523393 313 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 AP002812.4-201ENST00000532139 286 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGN4O00479 AC026464.5-201ENST00000562497 722 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 AC006023.2-201ENST00000609916 167 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 AC004696.1-201ENST00000614345 607 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGN4O00479 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGN4O00479 AP000553.5-201ENST00000641933 54 ntBASIC1.95□□□□□ -2.1
HMGN4O00479 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.95□□□□□ -2.1
HMGN4O00479 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGN4O00479 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGN4O00479 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGN4O00479 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HMGN4O00479 SNORA51.2-201ENST00000364595 132 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGN4O00479 RNU1-73P-201ENST00000383971 164 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGN4O00479 SNORA11.4-201ENST00000408823 129 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGN4O00479 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGN4O00479 AC004022.2-201ENST00000413824 193 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.94□□□□□ -2.1
HMGN4O00479 EI24P1-201ENST00000416584 867 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 AC023128.2-201ENST00000420880 1223 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGN4O00479 RPL37P6-202ENST00000464216 403 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 AC128713.1-201ENST00000471495 306 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGN4O00479 RPS4XP6-201ENST00000477670 797 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 NCOR1P1-202ENST00000486162 291 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGN4O00479 KLHL2P1-201ENST00000508691 521 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGN4O00479 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGN4O00479 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 RN7SKP234-201ENST00000517173 224 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 AC104115.2-201ENST00000523026 687 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGN4O00479 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.94□□□□□ -2.1
HMGN4O00479 AL512310.1-201ENST00000548639 172 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 ISCA1P3-201ENST00000577104 373 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 OR4K7P-201ENST00000580232 945 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 uc_338.9-201ENST00000617424 182 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 AC139769.3-201ENST00000618383 175 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGN4O00479 AC119674.1-212ENST00000641155 993 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 AC010733.2-201ENST00000589496 5702 ntBASIC1.94□□□□□ -2.1
HMGN4O00479 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGN4O00479 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGN4O00479 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGN4O00479 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.93□□□□□ -2.1
HMGN4O00479 RNU6-525P-201ENST00000363685 104 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 RPL21P75-201ENST00000396599 483 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 RPL21P28-201ENST00000401418 483 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 AL592114.1-201ENST00000403842 483 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 RNA5SP338-201ENST00000410495 85 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGN4O00479 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGN4O00479 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGN4O00479 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGN4O00479 OR7L1P-201ENST00000456181 380 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 RPL21P39-201ENST00000463605 483 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 AC011979.1-201ENST00000472300 483 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 RPL21P93-201ENST00000480465 489 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 AC233702.1-201ENST00000482905 502 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 AC104687.1-201ENST00000485829 412 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 AC093591.1-201ENST00000491435 481 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 RPL21P16-201ENST00000495531 483 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 RPL23AP55-201ENST00000498163 452 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 SNORD59.2-201ENST00000516873 68 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGN4O00479 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGN4O00479 AC009063.1-201ENST00000563342 702 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.93□□□□□ -2.1
HMGN4O00479 AC092954.1-201ENST00000609121 445 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
HMGN4O00479 AL450472.3-201ENST00000615578 367 ntBASIC1.93□□□□□ -2.1
HMGN4O00479 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGN4O00479 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGN4O00479 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGN4O00479 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGN4O00479 AC116096.1-201ENST00000566804 2314 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.92□□□□□ -2.1
HMGN4O00479 RNU4-82P-201ENST00000362443 140 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.92□□□□□ -2.1
HMGN4O00479 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HMGN4O00479 AC240504.1-201ENST00000395709 845 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 RFESDP1-201ENST00000422350 461 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 AC005189.1-201ENST00000431286 310 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC1.92□□□□□ -2.1
HMGN4O00479 USP9YP8-201ENST00000441913 500 ntBASIC1.92□□□□□ -2.1
HMGN4O00479 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.92□□□□□ -2.1
HMGN4O00479 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.92□□□□□ -2.1
HMGN4O00479 DPPA3P1-201ENST00000448050 469 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms