Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
IFRD1O00458 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
IFRD1O00458 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.24□□□□□ -1.73
IFRD1O00458 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
IFRD1O00458 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.24□□□□□ -1.73
IFRD1O00458 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
IFRD1O00458 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.23□□□□□ -1.73
IFRD1O00458 AC118273.1-201ENST00000525324 3006 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
IFRD1O00458 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
IFRD1O00458 CCT4P2-201ENST00000233836 1548 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
IFRD1O00458 RNA5SP513-201ENST00000364648 118 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.23□□□□□ -1.73
IFRD1O00458 Y_RNA.560-201ENST00000384689 102 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 MTHFD2P2-201ENST00000407725 247 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 U3.42-201ENST00000408746 214 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.23□□□□□ -1.73
IFRD1O00458 MIR1911-201ENST00000410783 80 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.23□□□□□ -1.73
IFRD1O00458 AC018630.2-202ENST00000422992 927 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.23□□□□□ -1.73
IFRD1O00458 UBE2D3P2-201ENST00000424409 445 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.23□□□□□ -1.73
IFRD1O00458 RPL23AP52-201ENST00000439311 478 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AL353748.1-201ENST00000440753 474 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.23□□□□□ -1.73
IFRD1O00458 TPT1P14-201ENST00000448018 505 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.23□□□□□ -1.73
IFRD1O00458 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.23□□□□□ -1.73
IFRD1O00458 U3.44-201ENST00000458938 192 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC068587.2-201ENST00000478386 781 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 RPL31P60-201ENST00000478450 367 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC012181.1-201ENST00000479895 423 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 RPS6P4-201ENST00000494693 758 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 OR2A20P-203ENST00000498397 1268 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.23□□□□□ -1.73
IFRD1O00458 SNORA31.22-201ENST00000517204 135 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.23□□□□□ -1.73
IFRD1O00458 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
IFRD1O00458 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
IFRD1O00458 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
IFRD1O00458 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.23□□□□□ -1.73
IFRD1O00458 MTND3P12-201ENST00000559068 328 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC012417.1-201ENST00000582307 1039 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC006116.10-201ENST00000591836 581 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AL109653.1-201ENST00000603091 248 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 MIR432-201ENST00000606207 94 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.23□□□□□ -1.73
IFRD1O00458 AC009570.1-201ENST00000609599 745 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.23□□□□□ -1.73
IFRD1O00458 AC008121.2-201ENST00000614647 523 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 MIR7844-201ENST00000616161 122 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 MIR6076-201ENST00000617521 113 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AL603758.1-201ENST00000618654 241 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 XIST_intron.1-201ENST00000619444 68 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
IFRD1O00458 AC006111.3-201ENST00000622137 383 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC112204.3-201ENST00000623822 332 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC011944.2-201ENST00000624440 683 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 AC092192.1-201ENST00000633154 1018 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
IFRD1O00458 MTND5P33-201ENST00000571250 1450 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.23□□□□□ -1.73
IFRD1O00458 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
IFRD1O00458 AC012321.1-201ENST00000561622 1588 ntBASIC4.23□□□□□ -1.73
IFRD1O00458 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.22□□□□□ -1.73
IFRD1O00458 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.22□□□□□ -1.73
IFRD1O00458 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFRD1O00458 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
IFRD1O00458 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
IFRD1O00458 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.22□□□□□ -1.73
IFRD1O00458 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
IFRD1O00458 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
IFRD1O00458 SNORA23-201ENST00000365128 182 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 AL590704.1-201ENST00000402856 794 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 AL139095.3-201ENST00000419672 1203 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.22□□□□□ -1.73
IFRD1O00458 C4BPAP2-201ENST00000428434 478 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.22□□□□□ -1.73
IFRD1O00458 MED14P1-201ENST00000430517 648 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.22□□□□□ -1.73
IFRD1O00458 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.22□□□□□ -1.73
IFRD1O00458 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.22□□□□□ -1.73
IFRD1O00458 AL049874.1-201ENST00000489560 388 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 RPL35P6-201ENST00000490024 372 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
IFRD1O00458 AC135721.1-201ENST00000497954 479 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 AC010486.2-201ENST00000505572 483 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 AC005178.1-201ENST00000508392 440 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 AC017037.1-201ENST00000508460 471 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.22□□□□□ -1.73
IFRD1O00458 MRPS36P5-201ENST00000551909 298 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.22□□□□□ -1.73
IFRD1O00458 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.22□□□□□ -1.73
IFRD1O00458 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.22□□□□□ -1.73
IFRD1O00458 TVP23BP1-201ENST00000557500 617 ntBASIC4.22□□□□□ -1.73
IFRD1O00458 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms