Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RN7SL339P-201ENST00000580597 296 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 MIR3939-201ENST00000582614 106 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 CCDC58P3-201ENST00000590792 430 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC079089.3-201ENST00000603094 673 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 U1.23-201ENST00000610293 146 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC005344.1-201ENST00000613391 459 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 RNU1-68P-201ENST00000615382 146 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 U1.39-201ENST00000621562 146 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AP003355.3-201ENST00000623465 114 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 TPTE2P4-201ENST00000258589 1605 ntBASIC2.48□□□□□ -2.01
SMKR1H3BMG3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SMKR1H3BMG3 AC109315.1-201ENST00000584143 1347 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC005539.1-201ENST00000443768 1479 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC012618.3-205ENST00000637896 1496 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC068538.1-201ENST00000376856 336 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 RNU6-1122P-201ENST00000384449 107 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AL022722.2-201ENST00000402519 180 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC011242.1-201ENST00000433596 1158 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 MTCYBP45-201ENST00000435243 565 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 MTND4P6-201ENST00000438297 472 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 RN7SL459P-201ENST00000481078 302 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC093752.1-206ENST00000511823 336 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 GMPSP1-201ENST00000514075 579 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 RNU6-583P-201ENST00000516012 92 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 SCARNA20.6-201ENST00000517251 106 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC009643.1-201ENST00000532030 391 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC090615.1-201ENST00000577519 154 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC006116.7-201ENST00000590141 756 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 VN1R78P-201ENST00000597393 564 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC068790.4-201ENST00000602474 263 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 DUXAP4-201ENST00000603046 613 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC096947.1-201ENST00000603233 470 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 BNIP3P11-201ENST00000603878 563 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AL390208.1-201ENST00000605885 644 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 RNU1-30P-201ENST00000606575 163 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC019176.2-201ENST00000611579 315 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AL450472.3-201ENST00000615578 367 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AL138955.1-201ENST00000622881 1040 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 OR1S1-201ENST00000624470 978 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC119674.1-207ENST00000641355 633 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AC012321.1-201ENST00000561622 1588 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 AP003122.5-201ENST00000527668 3766 ntBASIC2.47□□□□□ -2.01
SMKR1H3BMG3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMKR1H3BMG3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
SMKR1H3BMG3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
SMKR1H3BMG3 AP004289.2-201ENST00000444413 1457 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AL356274.2-201ENST00000624379 3752 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 RNU6-28P-201ENST00000362378 107 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 RN7SKP280-201ENST00000364196 304 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 RNU4-51P-201ENST00000364206 140 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 RNA5SP139-201ENST00000364340 117 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 RNU6-76P-201ENST00000384060 104 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AL031679.1-201ENST00000400616 525 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 Z75741.2-201ENST00000417272 1167 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.46□□□□□ -2.02
SMKR1H3BMG3 ATG3P1-201ENST00000419507 911 ntBASIC2.46□□□□□ -2.02
SMKR1H3BMG3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms