Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 MIR6133-201ENST00000617057 108 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 AP005432.1-201ENST00000580891 3485 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 API5P2-201ENST00000397055 1498 ntBASIC6.19□□□□□ -1.42
USP17L3A6NCW0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
USP17L3A6NCW0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AC020633.1-201ENST00000468439 2247 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 RPL32P3-201ENST00000359025 275 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 Y_RNA.28-201ENST00000362554 111 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 RN7SKP113-201ENST00000363891 295 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AC117470.1-201ENST00000381974 330 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AL109755.1-201ENST00000401791 649 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 PMCHL1-202ENST00000423102 261 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AC091390.1-201ENST00000433904 331 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AC005019.1-201ENST00000436455 431 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 FABP5P14-201ENST00000437273 393 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 RPL32P28-201ENST00000443577 397 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 ABCC13-202ENST00000463099 3842 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AC135721.1-201ENST00000497954 479 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 MRPS33P2-201ENST00000507850 322 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 MTCO3P44-201ENST00000510977 541 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 SMURF2P1-201ENST00000514992 481 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 Y_RNA.720-201ENST00000517166 92 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 COPS8P3-201ENST00000526024 482 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AC068790.4-201ENST00000602474 263 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AC104662.1-201ENST00000604448 511 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AP005432.2-201ENST00000608162 586 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AC091925.1-201ENST00000623204 462 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AC073869.10-201ENST00000642016 354 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 AC026951.1-201ENST00000559530 2459 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 GABPAP-201ENST00000419271 1356 ntBASIC6.18□□□□□ -1.42
USP17L3A6NCW0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USP17L3A6NCW0 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 Y_RNA.31-201ENST00000362574 102 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 RNU6-1188P-201ENST00000363795 107 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 Y_RNA.212-201ENST00000364177 102 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 MIR589-201ENST00000385238 99 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 AC114491.1-201ENST00000416095 246 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 AC119751.6-201ENST00000416712 186 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 CALM2P2-201ENST00000428512 440 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 IPO7P1-201ENST00000442031 636 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 AL354714.3-201ENST00000447284 493 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 REG1CP-206ENST00000447469 496 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 MTCYBP40-201ENST00000509390 1135 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 AC011626.1-201ENST00000604710 562 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 OR9K1P-202ENST00000641111 3217 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 SCARNA15-201ENST00000607520 4325 ntBASIC6.17□□□□□ -1.42
USP17L3A6NCW0 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.17□□□□□ -1.42
USP17L3A6NCW0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP17L3A6NCW0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms